| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2942 |
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| Symbol | gabT2 |
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| ID | 5587683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 2953258 |
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| End bp | 2954538 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640926591 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001463972 |
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| Protein GI | 157158550 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCA ATAAAGAGTT AATGCAGCGC CGCAGTCAGG CGATTCCCCG TGGCGTTGGG
CAAATTCACC CGATTTTCGC TGACCGCGCG GAAAACTGCC GGGTGTGGGA CGTTGAAGGC
CGTGAGTATC TTGATTTCGC GGGCGGGATT GCGGTGCTCA ATACCGGGCA CCTGCATCCG
AAAGTGGTTG CCGCGGTGGA AGCGCAGTTG AAAAAACTGT CGCACACCTG CTTCCAGGTG
CTGGCCTACG AGCCGTATCT GGAGCTGTGC GAGATTATGA ATCAGAAGGT GCCGGGCGAT
TTTGCCAAGA AAACGCTGCT GGTTACGACC GGTTCCGAAG CGGTGGAAAA CGCGGTAAAA
ATCGCCCGTG CCGCCACCAA ACGTAGCGGT ACCATCGCCT TTAGCGGCGC GTATCACGGG
CGCACGCATT ACACGCTGGC GCTGACCGGC AAGGTGAATC CGTACTCTGC GGGCATGGGG
CTGATGCCTG GGCACGTTTA TCGCGCGCTT TATCCTTGCC CGCTGCACGG CATCAGTGAA
GATGACGCTA TCGCCAGCAT CCATCGAATC TTCAAAAATG ACGCCGCGCC GGAAGATATC
GCCGGCATCG TGATTGAACC GGTTCAGGGC GAAGGCGGTT TCTACGCCAC TACGCCTGCT
TTTATGCAGC GTTTACGCGC GCTGTGTGAC GAGCACGGGA TCATGCTGAT TGCCGATGAA
GTGCAGAGCG GCGCGGGGCG TACCGGCACG CTGTTTGCGA TGGAGCAGAT GGGCGTTGCG
CCGGATCTCA CCACCTTTGC GAAATCGATC GCGGGCGGCT TCCCGCTGGC GGGCGTCACC
GGGCGCGCGG AAGTGATGGA TGCCGTCGCT CCAGGCGGTC TGGGCGGCAC CTATGCGGGT
AACCCGATTG CCTGCGTGGC CGCGCTGGAA GTGTTGAAGG TGTTCGAGCA GGAAAATCTG
CTGCAAAAAG CCAACGATCT GGGGCAGAAG TTGAAAGACG GATTGCTGGC AATAGCCGAA
AAACACCCGG AGATCGGCGA CGTACGCGGG CTGGGGGCGA TGATCGCCAT TGAGCTGTTT
GAAGACGGCG ATCACAACAA GCCGGACGCC AAACTCACCG CCGAGATCGT GGCTCGCGCC
CGCGATAAAG GCCTGATTCT TCTCTCCTGC GGCCCGTATT ACAACGTGCT GCGCATCCTT
GTACCGCTCG CCATTGAAGA CGCTCAGATC CGTCAGGGTC TGGAGATCAT CAGCCAGTGT
TTTGATGAGG CGAAGCAGTA G
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| Protein sequence | MSSNKELMQR RSQAIPRGVG QIHPIFADRA ENCRVWDVEG REYLDFAGGI AVLNTGHLHP
KVVAAVEAQL KKLSHTCFQV LAYEPYLELC EIMNQKVPGD FAKKTLLVTT GSEAVENAVK
IARAATKRSG TIAFSGAYHG RTHYTLALTG KVNPYSAGMG LMPGHVYRAL YPCPLHGISE
DDAIASIHRI FKNDAAPEDI AGIVIEPVQG EGGFYATTPA FMQRLRALCD EHGIMLIADE
VQSGAGRTGT LFAMEQMGVA PDLTTFAKSI AGGFPLAGVT GRAEVMDAVA PGGLGGTYAG
NPIACVAALE VLKVFEQENL LQKANDLGQK LKDGLLAIAE KHPEIGDVRG LGAMIAIELF
EDGDHNKPDA KLTAEIVARA RDKGLILLSC GPYYNVLRIL VPLAIEDAQI RQGLEIISQC
FDEAKQ
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