| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2941 |
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| Symbol | gabD |
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| ID | 5588281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 2951796 |
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| End bp | 2953244 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640926590 |
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| Product | succinate-semialdehyde dehydrogenase I |
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| Protein accession | YP_001463971 |
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| Protein GI | 157157757 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTA ACGACAGTAA CTTATTCCGC CAGCAGGCGT TGATTAACGG GGAATGGTTG
GACGCCAACG ATGGTGAAGT CATCGACGTC ACCAATCCGG CGAACGGCGA CAAGCTGGGT
AGCGTACCCA AAATGGGCGC GGATGAAACC CGCGCCGCTA TCGACGCCGC CAACCGCGCT
CTGCCCGCCT GGCGTGCACT CACCGCCAAA GAACGCGCCA ACATTCTGCG CAACTGGTTC
AATTTGATGA TGGAGCATCA GGACGATTTA GCGCGCCTGA TGACCCTCGA ACAGGGCAAA
CCGCTGGCTG AAGCGAAAGG CGAAATTAGC TACGCCGCCT CCTTTATTGA GTGGTTTGCT
GAAGAAGGTA AACGCATTTA TGGCGACACC ATTCCTGGTC ATCAGGCCGA TAAGCGCCTG
ATTGTTATCA AGCAGCCGAT TGGCGTTACC GCAGCTATCA CGCCGTGGAA CTTCCCGGCG
GCGATGATTA CCCGTAAAGC CGGCCCGGCG CTGGCGGCAG GCTGCACCAT GGTGCTGAAG
CCCGCCAGTC AGACGCCGTT CTCTGCGCTG GCGCTGGCGG AGCTGGCGAT TCGCGCGGGC
ATTCCGGCTG GCGTATTTAA CGTGGTCACC GGTTCGGCGG GCGCGGTGGG TAACGAACTG
ACCAGCAACC CGCTGGTGCG CAAGCTGTCG TTTACCGGTT CGACCGAAAT TGGCCGCCAG
TTAATGGAAC AGTGCGCGAA AGACATCAAA AAAGTGTCGC TGGAGCTCGG CGGCAACGCG
CCGTTTATCG TCTTTGACGA TGCCGACCTC GATAAAGCCG TGGAAGGCGC ACTGGCCTCG
AAATTCCGCA ACGCCGGGCA AACCTGCGTC TGCGCCAACC GTTTATACGT GCAGGACGGC
GTGTATGACC GCTTTGCCGA AAAATTACAG CAGGCGGTGA GCAAACTGCA CATCGGCGAC
GGGCTGGAGA AAGGCGTCAC CATCGGGCCG CTGATCGATG AAAAAGCGGT AGCAAAAGTG
GAAGAGCATA TTGCCGATGC CCTGGAGAAA GGTGCGCGTG TGGTTTGCGG CGGTAAAGCA
CACGAACGCG GCGGCAACTT CTTCCAGCCG ACCATTCTGG TGGACGTTCC GGCCAACGCT
AAAGTGTCGA AAGAAGAGAC GTTCGGCCCC CTCGCCCCGC TGTTCCGTTT TAAAGATGAA
GCCGATGTGA TTGCACAAGC CAATGACACC GAGTTTGGTC TTGCCGCCTA TTTCTACGCC
CGTGATTTAA GCCGCGTCTT CCGCGTGGGC GAAGCGCTGG AGTACGGCAT CGTCGGCATC
AATACCGGGA TTATTTCCAA TGAAGTGGCC CCGTTCGGCG GCATTAAAGC CTCGGGTCTG
GGTCGTGAAG GTTCGAAGTA TGGCATCGAA GATTACTTAG AAATCAAATA TATGTGCATC
GGTCTTTAA
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| Protein sequence | MKLNDSNLFR QQALINGEWL DANDGEVIDV TNPANGDKLG SVPKMGADET RAAIDAANRA
LPAWRALTAK ERANILRNWF NLMMEHQDDL ARLMTLEQGK PLAEAKGEIS YAASFIEWFA
EEGKRIYGDT IPGHQADKRL IVIKQPIGVT AAITPWNFPA AMITRKAGPA LAAGCTMVLK
PASQTPFSAL ALAELAIRAG IPAGVFNVVT GSAGAVGNEL TSNPLVRKLS FTGSTEIGRQ
LMEQCAKDIK KVSLELGGNA PFIVFDDADL DKAVEGALAS KFRNAGQTCV CANRLYVQDG
VYDRFAEKLQ QAVSKLHIGD GLEKGVTIGP LIDEKAVAKV EEHIADALEK GARVVCGGKA
HERGGNFFQP TILVDVPANA KVSKEETFGP LAPLFRFKDE ADVIAQANDT EFGLAAYFYA
RDLSRVFRVG EALEYGIVGI NTGIISNEVA PFGGIKASGL GREGSKYGIE DYLEIKYMCI
GL
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