Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_2940 |
Symbol | |
ID | 5589631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 2950505 |
End bp | 2951773 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640926589 |
Product | hydroxyglutarate oxidase |
Protein accession | YP_001463970 |
Protein GI | 157154793 |
COG category | [R] General function prediction only |
COG ID | [COG0579] Predicted dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGATT TTGTGATTAT TGGCGGTGGC ATCATCGGCA TGTCGACCGC CATGCAACTG ATTGATGTCT ACCCGGACGC CCGCATTGCG TTGCTGGAAA AAGAGTCCGG CCCGGCCTGT CACCAGACGG GCCACAACAG CGGCGTGATC CATGCCGGGG TTTATTACAC GCCCGGTAGC CTGAAGGCAC AGTTTTGCCT GGCGGGAAAC CGCGCCACTA AAGCCTTTTG CGATCAAAAC GGCATTCGCT ATGACAACTG CGGCAAGATG CTGGTCGCCA CCTCTGAACT CGAAATGGAA CGGATGCGCG CGTTGTGGGA ACGCACGGCG GCAAACGGTA TCGAGCGCGA GTGGTTAAAC GCCGTGGAAC TGCGCGAGCG CGAACCGAAT ATCACCGGGC TTGGCGGCAT TTTTGTGCCG TCCAGCGGCA TTGTCAGCTA CCGCGAAGTC ACAGCGGCGA TGGCAAAAAT TTTCCAGGCC AGAGGCGGTG AGATTATTTA TAACGCCGAA GTCAGCGCCC TCAGTGAGCA TAAAAACGGC GTGGTCGTCC GAACCCGTCA GGGCGGCGAA TATGAAGCAT CGACGCTGAT TAGCTGTTCC GGGCTGATGG CTGACCGGCT GGTGAAAATG CTCGGCCTCG AACCGGGTTT TATTATCTGC CCGTTCCGTG GCGAGTATTT CCGCCTTGCG CCGGAGCATA ACCAGATTGT TAACCATCTG ATTTACCCCA TTCCCGACCC GGCAATGCCG TTTTTGGGCG TTCATCTCAC CCGCATGATC GACGGCAGCG TGACCGTCGG GCCAAACGCG GTGCTGGCTT TCAAACGCGA AGGCTATCGC AAGCGCGACT TCTCATTTAG CGACACGCTG GAGATTTTGG GCTCGTCGGG GATTCGCCGG GTGCTGCAAA ACCATCTACG CTCAGGACTG GGCGAGATGA AAAACTCGCT GTGCAAAAGC GGCTATCTGC GGCTGGTGCA AAAGTATTGT CCCCGGCTTT CGTTAAGCGA TCTCCAGCCC TGGCCCGCCG GTGTGCGGGC GCAGGCGGTA TCGCCGGACG GCAAGCTGAT TGACGATTTT CTGTTTGTCA CCACCCCGCG CACGATCCAC ACCTGCAATG CGCCCTCCCC GGCAGCGACA TCAGCAATTC CTATTGGTGC GCATATTGTC AGCAAGGTAC AAACGCTGTT GGCAAGCCAG AGTAACCCCG GACGCACGCT GCGAGCGGCA CGTAGTGTGG ATGCCTTACA CGCCGCATTT AATCAATAA
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Protein sequence | MYDFVIIGGG IIGMSTAMQL IDVYPDARIA LLEKESGPAC HQTGHNSGVI HAGVYYTPGS LKAQFCLAGN RATKAFCDQN GIRYDNCGKM LVATSELEME RMRALWERTA ANGIEREWLN AVELREREPN ITGLGGIFVP SSGIVSYREV TAAMAKIFQA RGGEIIYNAE VSALSEHKNG VVVRTRQGGE YEASTLISCS GLMADRLVKM LGLEPGFIIC PFRGEYFRLA PEHNQIVNHL IYPIPDPAMP FLGVHLTRMI DGSVTVGPNA VLAFKREGYR KRDFSFSDTL EILGSSGIRR VLQNHLRSGL GEMKNSLCKS GYLRLVQKYC PRLSLSDLQP WPAGVRAQAV SPDGKLIDDF LFVTTPRTIH TCNAPSPAAT SAIPIGAHIV SKVQTLLASQ SNPGRTLRAA RSVDALHAAF NQ
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