| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2906 |
|---|
| Symbol | |
|---|
| ID | 5588398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 2907967 |
|---|
| End bp | 2909523 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640926559 |
|---|
| Product | resolvase family site-specific recombinase |
|---|
| Protein accession | YP_001463941 |
|---|
| Protein GI | 157158673 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGCG AAAATGACAA AAATCATAGA GTTAGGGTCG CGCAGTACTT GAGGATGTCT
ACCGACCATC AGCAATATTC TTTACATAAT CAGTCCGAAT ATATCAAAGA TTATGCTGAA
AAGAACAATA TGGAAATCGC TTATACCTAC GATGATGCAG GTAAGAGCGG AGTCAGTATC
GTAGGCAGGC ATTCTTTGCA GCAGTTACTT AGCGATGTAG AACAAAAGAA AATAGATATA
CAGGCTGTAT TATTTTATGA TGTGAGCCGT TTTGGTCGTT TTCAAAATAG TGATGAAGCG
GCATATTATT CCTTTCTATT TGAGAGAAAT GGTGTAGATC TTATATATTG TTCCGAACCT
ATACCCACTA AAGATTTCCC TTTAGAGTCC TCTGTTATAC TGAATATAAA AAGATCTAGT
GCTGCATATC ACAGCAGGAA TTTATCTGAA AAGGTATTTA TAGGGCAAGT AAATTTAATA
AAGCTTGGTT ATCATCAAGG CGGTATGGCT GGTTATGGGC TGAGACGTCT TTTAGTAGAC
GAAAATGGCA TAGCTAAAGA AATATTGAGT TTCCGCAAAA GAAAGAGTAT TCAAACAGAT
AGGGTAATAT TAATTCCGGG ACCAAAAAAT GAAATAAAAA TTGTAAATAG AATATATGAT
CTCTTTATAG ATAATAACGT CCCAGAATTC ATTATTGCTG AGAGATTAAA TGAACAGAAC
ATACCTGCAG AAAATGGAAC ATTATGGACT CGTGCAAAAA TACATCAAAT TTTGACAAAT
GAAAAATATA TTGGAAACAA CATATATAAC AAAACCTCAT CTAAATTAAA AAGTAGGCTT
GTAAAAAACC CCAAACATGA ATGGGTTAGA TGTGACAAGG CATATAAACC TATTATTTCA
AAGAAAAAAT ACAATAAAGC TCAAGAAATA ATTCAGCTCC GATCCATTCA TTTGACTAAT
GAAGATCTAT TAGAAAAACT AAAACAAAAA TTAGAATCTA ATGGAAAACT ATCAGGCTTT
ATCATTGATG AAGATGATAC AGGCCCTTCA TCTTCTGTTT ATAGAACCCG ATTTGGTGGT
CTTTTAAGAG CATATACTTT GATTGGTTAT AAGCCAGAAC ATGATTACAG CTATCTCAAA
ATAAATGAAG CACTAAGATC ATTTCACTCA GAGATAATTG AGGATTTTAA GGGTGAAATT
TTAAAAAGTA ACTGTCATAT AGACGAGTAT AAATATGCCC CAATGCTTTA CATCAATGAT
GAGTTTTTAA TTTCCGTCCT TGTTACTAAA TGCATACATA TGAAATCAGG TAAACTTAGA
TGGAAAGTCC GGTTTGATAA CTCACAGAAA GCAGACATAA CAATTGTTAT ACGAATGAAT
TCACAAAATA TTTCACCTCT TGATTTTTAT ATCATACCAA AGATTGAAAA CGAATATAAT
AAAATGTGCA TGACGGAAAC AAACAACATT CGATTAGATC TCTATAGATT TGATAATCTT
GATAAACTTC TACAAATTAT TACTCGCATG AAAGTGAGGG AACTATATGC TGCCTGA
|
|---|
| Protein sequence | MASENDKNHR VRVAQYLRMS TDHQQYSLHN QSEYIKDYAE KNNMEIAYTY DDAGKSGVSI
VGRHSLQQLL SDVEQKKIDI QAVLFYDVSR FGRFQNSDEA AYYSFLFERN GVDLIYCSEP
IPTKDFPLES SVILNIKRSS AAYHSRNLSE KVFIGQVNLI KLGYHQGGMA GYGLRRLLVD
ENGIAKEILS FRKRKSIQTD RVILIPGPKN EIKIVNRIYD LFIDNNVPEF IIAERLNEQN
IPAENGTLWT RAKIHQILTN EKYIGNNIYN KTSSKLKSRL VKNPKHEWVR CDKAYKPIIS
KKKYNKAQEI IQLRSIHLTN EDLLEKLKQK LESNGKLSGF IIDEDDTGPS SSVYRTRFGG
LLRAYTLIGY KPEHDYSYLK INEALRSFHS EIIEDFKGEI LKSNCHIDEY KYAPMLYIND
EFLISVLVTK CIHMKSGKLR WKVRFDNSQK ADITIVIRMN SQNISPLDFY IIPKIENEYN
KMCMTETNNI RLDLYRFDNL DKLLQIITRM KVRELYAA
|
|---|
| |