| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2905 |
|---|
| Symbol | |
|---|
| ID | 5586135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 2906374 |
|---|
| End bp | 2907684 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640926558 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_001463940 |
|---|
| Protein GI | 157158443 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0582] Integrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGAATTG CTGAGAACTA CGAGTTATGG CACCCTGAAT GGGACCCACG AAGATGGGTC
CTAAAATCGA GGGTCCCAAA CATGGCCAAA ATCGCTAAGA AGCTCACTGA CACTGAAATC
AAAAGCACCA AACCTGCCGA AAAAGAGGTT AACCTTTTTG ACGGCGATGG TTTGCTGTTG
CGAATCGCTC CCCTGGCGAA GGGAGGGAAG AAAAATTGGT ATTTCAGATA TGCAGTGCCT
GTGACCAAAA AGCGAACTAA GGTGAGCTTA GGAACCTATC CTCACCTTAC ACTTGCGAAG
GCACGAGCTT TACGTGATGA ATACTTGTCG TTGCTTACAA ATGGTATAGA CCCCCAAGTT
CATAACAACC AAAAAGCCAA TGCACTGAAA GATGCCACGG AACATACATT TCAAGCAGTA
GCCAAGAAGT GGCTTGATGA GAAAGTCAAA ACGTCAGGCA TCTCCCAAGA TCATGCTAAC
GACATCTGGC GAAGCCTAGA GAGAAATATC TTTTCCACAT TGGGTGATAC CCCAATTAAG
GAGATTCGCC CTAAAATGCT TAAACAGCAT TTAGAACCCA TAGAAAAACG AGGTGTCCTT
GAAACACTTC GCCGCATCAT ATCCCGCCTG AATGAAATTT TCCGCTATGC AGCAACAGAA
GAACTCATAG AATTCAACCC GGCAGACAAC CTGGGGCAAC GGTTCAGCAA GCCAAAAAAA
CAGAATATGC CAGCATTACC CCCTTCCGAA CTCCCTCGCT TCTTGGTTGC TCTAAACAAT
GCTTCTATCC GTTTGGAAAC AAGGCTACTG ATTGAGTGGC AACTTCTCAC ATGGGTTCGC
CCAGGTGAAG CTGTTCGCAC AAGATGGTCA GATATTGATA TTGAAACTGG CATGTGGAAC
ATCCCGGCGG AGTTTATGAA AATGAAGAAG CCTCACAAAG TTCCACTGAG CAAAGAAGCT
TTGCGAGTTT TGGATTTAAT GAAAGTCATC AGCGGGCATA GAGAGTGGGT GTTCCCCAGT
ATCAAAGCTC CACTCAATCA CATGCATGAA CAAACAGCTA ATGCGGCCAT AATCCGTATG
GGTTTCGGAG GTGAGCTTGT AGCTCACGGT ATGCGATCCA TTGCTAGAAC GGCTGCTGAG
GAGTCTGGCA AGTTTAGGAC TGATGTCTTA GAAGCCGCCC TTGCCCACTC GAAGAAAGAT
GAAATAATTG CAGCCTACAA TCGTGCAGAG TATCTCACTG AACGGGTGGT TCTCATGCAA
TGGTGGAGTG ACTATGTTTC GTCTCAAAAA TGCAAAGTTA TTGCCGCATA A
|
|---|
| Protein sequence | MRIAENYELW HPEWDPRRWV LKSRVPNMAK IAKKLTDTEI KSTKPAEKEV NLFDGDGLLL
RIAPLAKGGK KNWYFRYAVP VTKKRTKVSL GTYPHLTLAK ARALRDEYLS LLTNGIDPQV
HNNQKANALK DATEHTFQAV AKKWLDEKVK TSGISQDHAN DIWRSLERNI FSTLGDTPIK
EIRPKMLKQH LEPIEKRGVL ETLRRIISRL NEIFRYAATE ELIEFNPADN LGQRFSKPKK
QNMPALPPSE LPRFLVALNN ASIRLETRLL IEWQLLTWVR PGEAVRTRWS DIDIETGMWN
IPAEFMKMKK PHKVPLSKEA LRVLDLMKVI SGHREWVFPS IKAPLNHMHE QTANAAIIRM
GFGGELVAHG MRSIARTAAE ESGKFRTDVL EAALAHSKKD EIIAAYNRAE YLTERVVLMQ
WWSDYVSSQK CKVIAA
|
|---|
| |