Gene EcE24377A_2857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_2857 
SymbolrseB 
ID5587495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp2857600 
End bp2858556 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content51% 
IMG OID640926507 
Productperiplasmic negative regulator of sigmaE 
Protein accessionYP_001463894 
Protein GI157156863 
COG category[T] Signal transduction mechanisms 
COG ID[COG3026] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00692744 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAC TTTGGTTTGC CATGTCATTA GTGACAGGTA GCCTGTTATT CTCTGCTAAC 
GCCTCGGCCA CTCCCGCGTC CGGGGCGTTA TTACAGCAGA TGAACCTGGC CAGTCAGTCA
CTGAATTACG AGCTGTCATT CATCAGCATC AATAAACAGG GTGTTGAGTC TCTGCGTTAT
CGACATGCAC GCCTCGATAA CCGTCCTCTT GCACAATTGT TGCAAATGGA TGGCCCGCGC
CGGGAAGTGG TACAGCGCGG CAATGAAATC AGCTATTTTG AACCGGGACT TGAACCGTTC
ACGCTTAATG GCGATTACAT TGTTGATTCT CTGCCATCGC TTATCTATAC CGATTTCAAA
CGCCTTTCTC CTTACTACGA CTTTATCTCC GTCGGGCGCA CGCGTATTGC TGATCGTCTT
TGCGAAGTCA TTCGCGTGGT TGCCCGAGAT GGTACACGCT ACAGCTACAT CGTGTGGATG
GACACCGAAT CGAAATTACC GATGCGGGTT GATCTCCTTG ATCGCGATGG TGAAACGCTG
GAACAATTTC GCGTGATTGC TTTTAACGTC AATCAGGATA TCAGCAGCAG TATGCAGACG
CTGGCGAAGG CAAATTTGCC GCCGTTGCTT TCTGTTCCTG TAGGTGAAAA AGCTAAATTC
AGCTGGACGC CAACCTGGTT GCCACAGGGT TTTAGCGAAG TTTCCAGTAG TCGACGTCCG
CTACCGACGA TGGACAACAT GCCTATCGAA TCACGTCTCT ATTCCGACGG ATTATTCAGC
TTCTCGGTAA ACGTTAACCG CGCTACGCCA TCGAGCACCG ATCAGATGTT GCGCACCGGA
CGCAGAACCG TCAGTACAAG CGTACGTGAT AACGCCGAAA TCACCATTGT CGGTGAACTG
CCGCCGCAAA CGGCGAAACG CATTGCCGAG AATATTAAGT TCGGGGCAGC GCAATGA
 
Protein sequence
MKQLWFAMSL VTGSLLFSAN ASATPASGAL LQQMNLASQS LNYELSFISI NKQGVESLRY 
RHARLDNRPL AQLLQMDGPR REVVQRGNEI SYFEPGLEPF TLNGDYIVDS LPSLIYTDFK
RLSPYYDFIS VGRTRIADRL CEVIRVVARD GTRYSYIVWM DTESKLPMRV DLLDRDGETL
EQFRVIAFNV NQDISSSMQT LAKANLPPLL SVPVGEKAKF SWTPTWLPQG FSEVSSSRRP
LPTMDNMPIE SRLYSDGLFS FSVNVNRATP SSTDQMLRTG RRTVSTSVRD NAEITIVGEL
PPQTAKRIAE NIKFGAAQ