| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2844 |
|---|
| Symbol | |
|---|
| ID | 5587864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 2845742 |
|---|
| End bp | 2847160 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640926493 |
|---|
| Product | putative transglycosylase |
|---|
| Protein accession | YP_001463880 |
|---|
| Protein GI | 157155869 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCA TTCATACTCC CCTGACTTAT AACGAAATCA ACGGGAAACC TTTTGGCCTG
GATTACGAAC TGGCGAAACA GTTTGCCGAT TACCTCGGTG TAAAACTGAA AGTGACCGTG
CGGCAGAATA TCAGCCAGCT GTTTGACGAC CTCGATAATG GTAACGCCGA CCTGCTGGCG
GCAGGACTGG TCTATAACAG TGAGCGGGTA AAAAATTATC AGCCTGGCCC TACCTATTAT
TCCGTGTCAC AACAACTGGT TTATAAAGTG GGTCAGTATC GCCCGCGCAC ACTGGGCAAC
CTGACGGCGG AGCAACTCAC CGTTGCACCG GGTCACGTGG TGGTTAACGA TCTCCAAACC
CTGAAAGACA CAAAATTCCC GGAATTAAGC TGGAAGGTAG ACGACAAAAA AGGCTCTGCG
GAATTAATGG AAGATGTCAT CGAAGGAAAA CTCGATTACA CCATTGCTGA TTCTGTCGCC
ATCAGCCTGT TTCAGCGCGT TCACCCGGAG CTCGCCGTAG CGCTCGATAT CACCGATGAA
CAACCGGTGA CCTGGTTTAG CCCGTTAGAT GGCGATAATA CCCTTTCCGC CGCCCTGCTC
GACTTCTTCA ACGAAATGAA TGAAGACGGT ACGCTGGCAC GCATTGAAGA GAAATACCTG
GGGCATGGCG ATGATTTTGA TTACGTCGAT ACGCGCACAT TTTTACGCGC CGTCGATGCG
GTACTGCCGC AGTTAAAGCC CCTGTTTGAG AAATACGCCG AAGAAATTGA CTGGCGTTTG
CTGGCCGCTA TTGCTTATCA GGAATCGCAC TGGGATGCAC AGGCCACTTC ACCGACGGGT
GTGCGCGGCA TGATGATGTT AACCAAAAAT ACCGCGCAAA GCCTCGGCAT TACGGATCGT
ACCGATGCCG AACAGAGCAT CAGCGGTGGC GTGCGTTATT TGCAGGATAT GATGAGTAAA
GTGCCGGAAA GTGTGCCGGA GAACGAGCGG ATCTGGTTTG CCCTCGCTGC GTACAATATG
GGCTATGCGC ATATGCTGGA TGCCCGCGCC CTGACGGCAA AAACCAAAGG GAATCCTGAC
AGTTGGGCTG ACGTAAAACA GCGTCTGCCT TTACTTAGCC AGAAACCCTA TTACAGCAAG
CTGACTTACG GCTACGCTCG TGGACATGAA GCCTACGCTT ATGTCGAAAA TATTCGTAAG
TATCAGATTA GCCTGGTGGG TTATCTGCAA GAGAAAGAGA AGCAGGCTAC AGAAGCGGCG
ATGCAACTGG CGCAGGATTA TCCGGCGGTA TCGCCTACGG AGTTGGGCAA AGAGAAATTT
CCTTTTCTCT CGTTTCTTTC CCAGTCGTCA TCAAACTATT TGACCCATTC TCCCTCTCTG
CTGTTTTCCA GGAAAGGGAG TGAAGAGAAA CAAAATTAA
|
|---|
| Protein sequence | MSTIHTPLTY NEINGKPFGL DYELAKQFAD YLGVKLKVTV RQNISQLFDD LDNGNADLLA
AGLVYNSERV KNYQPGPTYY SVSQQLVYKV GQYRPRTLGN LTAEQLTVAP GHVVVNDLQT
LKDTKFPELS WKVDDKKGSA ELMEDVIEGK LDYTIADSVA ISLFQRVHPE LAVALDITDE
QPVTWFSPLD GDNTLSAALL DFFNEMNEDG TLARIEEKYL GHGDDFDYVD TRTFLRAVDA
VLPQLKPLFE KYAEEIDWRL LAAIAYQESH WDAQATSPTG VRGMMMLTKN TAQSLGITDR
TDAEQSISGG VRYLQDMMSK VPESVPENER IWFALAAYNM GYAHMLDARA LTAKTKGNPD
SWADVKQRLP LLSQKPYYSK LTYGYARGHE AYAYVENIRK YQISLVGYLQ EKEKQATEAA
MQLAQDYPAV SPTELGKEKF PFLSFLSQSS SNYLTHSPSL LFSRKGSEEK QN
|
|---|
| |