Gene EcE24377A_2834 details

Gene Information

• Locus tag: EcE24377A_2834
• ID: 5587308
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: -
• Start bp: 2829383
• End bp: 2832757
• Gene Length: 3375 bp
• Protein Length: 1124 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640926484
• Product: TPR repeat-containing protein
• Protein accession: YP_001463871
• Protein GI: 157155956

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGTGATT ATTCCGCGAA AACATTGCCA GATTGTTCAA TACACTGCCA CAAATCTTTT 
AATTCAGTAT GTCTTGTTAA TATTGAGGGC ACCATGACTC CAGTAAAAGT GTGGCAAGAG 
CGCGTTGAGA TCCCGACCTA TGAAACCGGG CCGCAGGATA TACATCCCAT GTTCCTGGAA 
AATCGCGTTT ATCAGGGATC GTCCGGCGCG GTTTATCCCT ACGGCGTGAC CGATACGCTG 
AGCGAGCAGA AAACCCTGAA ATCCTGGCAG GCGGTGTGGC TGGAAAACGA CTACATCAAA 
GTGATGATCC TGCCGGAACT GGGCGGTCGG GTGCATCGCG CATGGGATAA AGTGAAACAG 
CGCGATTTTG TCTATCACAA TGAAGTCATT AAACCTGCGC TGGTGGGGCT GCTGGGACCG 
TGGATCTCCG GTGGGATTGA GTTTAACTGG CCGCAACACC ATCGCCCGAC CACCTTTATG 
CCCGTTGATT TCACCCTCGA AGCCCATGAA GACGGTGCAC AGACGGTGTG GGTCGGCGAA 
ACGGAGCCGA TGCATGGTTT ACAGGTGATG ACAGGTTTCA CCCTGCGCCC TGACCGGGCG 
GCGCTGGAAA TCGCCAGCCG CGTCTATAAC GGCAACGCCA CGCCGCGTCA TTTCTTATGG 
TGGGCCAACC CGGCAGTGAA AGGGGGGGAA GGGCATCAGA GCGTCTTCCC GCCGGATGTA 
ACGGCGGTGT TTGATCACGG CAAACGAGCC GTCTCCGCTT TCCCCATCGC CACCGGCACT 
TACTACAAAG TGGACTACTC CGCTGGAGTG GACATTTCTC GCTATAAAAA TGTGCCCGTT 
CCAACCTCAT ATATGGCTGA AAAATCACAG TACGATTTTG TTGGCGCGTG GTGTCACGAT 
GAAGATGGCG GTTTGCTGCA CGTTGCCAAC CACCATATCG CGCCAGGTAA AAAACAGTGG 
AGTTGGGGAC ACAGTGAATT TGGCCAGGCG TGGGATAAGA GTCTGACCGA CAATAACGGC 
CCGTATATCG AACTGATGAC CGGTATTTTT GCCGATAACC AGCCCGATTT TACCTGGCTT 
GATGCTTACG AAGAGAAGCG TTTTGAGCAG TATTTCCTGC CTTATCATTC TTTGGGCATG 
GTGCAAAATG CCTCCCGCGA TGCGGTGATA AAACTCCAAC GTAGTGAGCG GGGGATTGAG 
TGGGGGCTGT ATGCCATCTC TCCGTTGAAC GGATACCGCC TGGCGATCCG CGAAATCGGC 
AAATGCAACG CGTTACTTGA TGATGCCGTG GCACTGATGC CTGCGACCGG CATCCAGGGC 
GTGTTGCACG GTATCAATCC TGAAAGGCTG ACCATTGAGC TCTCCGATGC CGACGGCAAT 
ATTGTACTGA GTTATCAGGA ACATCAGCCG CAAGAGTTGC CGTTGCCGGA CGTCGCCAAA 
GCGCCACTGT CAGCACAAGA CATTACCAGT ACAGATGAAG CCTGGTTTAT CGGTCAGCAT 
CTGGAGCAAT ATCATCACGC CAGCCGTTCA CCGTTCGATT ACTACCTGCG CGGCGTGGCG 
CTGGATCCGC TGGATTATCG CTGTAACCTG GCGCTGGCGA TGCTGGAATA TAACCGCGCC 
GATTTCCCGC AAGCGGTGGC GTATGCCACT CAGGCTCTGA AACGCGCACA TGCGCTGAAC 
AAAAATCCGC AGTGCGGACA GGCCAGTTTG ATTCGCGCCA GTGCTTACGA ACGTCAGGGA 
CAATATCAAC AAGCCGAAGA GGATTTCTGG CGTGCGGTCT GGAGCGGCAA CAGCAAAGCC 
GGTGGCTATT ATGGCCTGGC ACGACTGGCG GCGCGTAATG GTAACTTCGA CGCTGGTCTG 
GATTTTTGCC AACAAAGTCT TCGTGCCTGC CCAACCAATC AGGAAGTGCT TTGCCTGCAT 
AATCTGCTGC TGGTGTTAAG TGGTCGTCAG GACAACGCGC GTTTGCAGCG CGCGAAACTG 
CTGCGTGATT ATCCGCTGAA CGCCACTCTG TGGTGGCTGA ACTGGTTCGA TGGTCGTAGC 
GAATCAGCCC TCGCGCAGTG GCGCGGTCTG TGTCAGGGAC GCGACGTTAA CGCTCTGATG 
ACCGCCGGGC AACTGATTAA CTGGGGAATG CCCACCCTGG CGGCAGAGAT GCTGAACGCA 
CTGGACTGCC AGCGCACGCT GCCGCTTTAC CTGCAGGCGA GTTTATTGCC GAAAGCCGAA 
CGCGGCGAAC TGGTCGCAAA AGCCATTGAT GTCTTCCCGC AGTTTGTCCG TTTCCCGAAT 
ACGCTGGAAG AAGTGGCGGC GCTGGAGAGT ATTGAAGAGT GCTGGTTTGC CCGTCATTTA 
CTGGCCTGCT TCTACTACAA CAAGCGTAGC TACAACAAAG CCATTACCTT ATGGCAACGT 
TGCGTAGAGA TGTCGCCGGA GTTTGCCGAC GGCTGGCGCG GGTTAGCGAT CCATGCGTGG 
AATAAGCAAC ACGATTATGA GCTGGCCGCG CGTTATCTTG ATAATGCTTA TCAGCTTGCG 
CCGCAGGATG CACGTCTGCT TTTCGAACGG GATTTGCTTG ATAAGTTAAG CGGAGCCACA 
CCGGAGAAAC GACTGGCGCG TCTGGAAAAT AATCTGGAAA TTGCGCTGAA ACGCGACGAC 
ATGACAGCAG AGTTGCTCAA TTTGTGGCAT CTCACGGGTC AGGCAGACAA AGCGGCGGAC 
ATTCTCGCCA CGCGCAAATT CCACCCGTGG GAAGGCGGGG AAGGGAAGGT CACCAGTCAG 
TTTATCCTCA ACCAGTTATT ACGCGCCTGG CAGCACCTTG ATGCCAGACA GCCGCAGCAG 
GCCAGCGAAC TGCTTCATGC CGCGCTGCAT TATCCGGAGA ATTTAAGCGA AGGCCGTTTA 
CCGGGGCAAA CTGATAACGA CATCTGGTTC TGGCAGGCGA TATGCGCCAA CGCGCAGGGC 
GATGAAACTG AAGCGATGCG TTGTTTACGT CTGGCGGCGA CCGGCGATCG CACCATTAAC 
ATCCACAGTT ATTACAACGA TCAGCCGGTT GATTATCTCT TCTGGCAAGG AATGGCGCTG 
CGACTGCTGG GCGAACAACA CACCGCACAG CAACTGTTTA GTGAAATGAA ACAGTGGGCG 
CAAGAGATGG CGAAAACCAG TATTGAGGCG GATTTCTTTG CTGTTTCACA ACCTGATCTG 
TTGTCGCTGT ATGGCGATTT ACAACAGCAG CATAAAGAAA AATGCCTGAT GGTGGCGATG 
CTGGCGTCCG CGGGACTCGG GGAGGTTGCG CAATATGAGT CTGCTCGCGC TGAATTGACG 
GCGATTAATC CGGCCTGGCC GAAAGCGGCA TTATTCACCA CTGTGATGCC TTTTATTTTT 
AACTACGTTC ACTAA 

 

Protein sequence

MRDYSAKTLP DCSIHCHKSF NSVCLVNIEG TMTPVKVWQE RVEIPTYETG PQDIHPMFLE 
NRVYQGSSGA VYPYGVTDTL SEQKTLKSWQ AVWLENDYIK VMILPELGGR VHRAWDKVKQ 
RDFVYHNEVI KPALVGLLGP WISGGIEFNW PQHHRPTTFM PVDFTLEAHE DGAQTVWVGE 
TEPMHGLQVM TGFTLRPDRA ALEIASRVYN GNATPRHFLW WANPAVKGGE GHQSVFPPDV 
TAVFDHGKRA VSAFPIATGT YYKVDYSAGV DISRYKNVPV PTSYMAEKSQ YDFVGAWCHD 
EDGGLLHVAN HHIAPGKKQW SWGHSEFGQA WDKSLTDNNG PYIELMTGIF ADNQPDFTWL 
DAYEEKRFEQ YFLPYHSLGM VQNASRDAVI KLQRSERGIE WGLYAISPLN GYRLAIREIG 
KCNALLDDAV ALMPATGIQG VLHGINPERL TIELSDADGN IVLSYQEHQP QELPLPDVAK 
APLSAQDITS TDEAWFIGQH LEQYHHASRS PFDYYLRGVA LDPLDYRCNL ALAMLEYNRA 
DFPQAVAYAT QALKRAHALN KNPQCGQASL IRASAYERQG QYQQAEEDFW RAVWSGNSKA 
GGYYGLARLA ARNGNFDAGL DFCQQSLRAC PTNQEVLCLH NLLLVLSGRQ DNARLQRAKL 
LRDYPLNATL WWLNWFDGRS ESALAQWRGL CQGRDVNALM TAGQLINWGM PTLAAEMLNA 
LDCQRTLPLY LQASLLPKAE RGELVAKAID VFPQFVRFPN TLEEVAALES IEECWFARHL 
LACFYYNKRS YNKAITLWQR CVEMSPEFAD GWRGLAIHAW NKQHDYELAA RYLDNAYQLA 
PQDARLLFER DLLDKLSGAT PEKRLARLEN NLEIALKRDD MTAELLNLWH LTGQADKAAD 
ILATRKFHPW EGGEGKVTSQ FILNQLLRAW QHLDARQPQQ ASELLHAALH YPENLSEGRL 
PGQTDNDIWF WQAICANAQG DETEAMRCLR LAATGDRTIN IHSYYNDQPV DYLFWQGMAL 
RLLGEQHTAQ QLFSEMKQWA QEMAKTSIEA DFFAVSQPDL LSLYGDLQQQ HKEKCLMVAM 
LASAGLGEVA QYESARAELT AINPAWPKAA LFTTVMPFIF NYVH