| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2804 |
|---|
| Symbol | |
|---|
| ID | 5589744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 2797724 |
|---|
| End bp | 2802685 |
|---|
| Gene Length | 4962 bp |
|---|
| Protein Length | 1653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640926455 |
|---|
| Product | alpha-2-macroglobulin domain-containing protein |
|---|
| Protein accession | YP_001463842 |
|---|
| Protein GI | 157154935 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2373] Large extracellular alpha-helical protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGT TACGCGTAGC CGCCTGCATG CTAATGCTGG CGCTGGCAGG GTGCGACAAC
AACGATAACG CGCCAACAGC GGTGAAAAAA GATGCGCCTT CTGAAGTTAC TAAAGCGGCC
TCTTCAGAAA ACGCGAGTTC AGCAAAACTC TCCGTGCCGG AGAGACAAAA ACTGGCCCAA
CAGAGTGCCG GTAAGGTGCT GACATTGCTG GATCTCTCTG AAGTCCAACT TGATGGTGCA
GCCACGCTGG TGCTGACGTT CTCCATCCCT CTCGACCCGG ATCAGGATTT CTCACGCGTT
ATTCATGTCG TCGATAAAAA AAGCGGCAAA GTGGATGGTG CCTGGGAGCT GTCAGATAAT
CTTAAAGAGC TGCGTTTACG CCACCTCGAA CCGAAACGTG ATTTGATCGT TACTATTGGC
AAGGAGGTCA AAGCACTCAA CAACGCAACC TTCAGTAAAG ATTACGAAAA AACTATAACT
ACCCGCGACA TCCAACCCAG CGTCGGTTTT GCCAGCCGTG GTTCGCTGCT GCCTGGTAAA
GTCGTTGAAG GGCTGCCGGT AATGGCGCTC AACGTTAATA ATGTCGATGT TAACTTCTTC
CGCGTTAAGC CAGAATCTCT GCCAGCATTC ATTAGCCAAT GGGAATACCG CAATTCGCTG
GCGAACTGGC AGTCAGACAA ACTGCTGCAG ATGGCGGATC TGGTCTACAC CGGACGGTTT
GATCTCAATC CTGCGCGTAA CACCCGTGAA AAATTATTGC TGCCGCTGGG CGATATCAAA
CCGCTTCAGC AGGCGGGCGT GTATCTGGCT GTGATGAATC AGGCTGGACG TTACGATTAC
AGTAATCCCG CGACGCTGTT TACGTTAAGT GATATCGGCG TTTCAGCTCA CCGTTATCAC
AATCGTCTGG ATATCTTTAC CCAAAGTCTG GAAAACGGCG CGGCCCAGCA AGGAATTGAA
ATCTCTTTAT TAAATGAGAA AGGGCAGACT CTGACTCAGG CAACCAGTGA CGCTCAGGGG
CATGTGCAGC TGGAAAATGA TAAAAACGCG GCATTACTGT TGGCGCGTAA AGACGGTCAG
ACAACGCTAC TCGATTTAAA ACTTCCGGCG CTGGACTTAG CAGAATTTAA CATTGCTGGC
GCGCCAGGCT ATAGCAAACA GTTTTTCATG TTTGGCCCAC GCGATCTTTA TCGCCCGGGT
GAAACGGTAA TCCTCAATGG TTTGCTGCGT GATGCAGACG GTAAAGCGTT GCCCAATCAA
CCCATCAAGT TAGACGTGAT TAAACCCGAT GGGCAGGTAC TCAGGAGCGT CGTTAGTCAG
CCGGAAAATG GCCTCTACCA CTTTACCTGG CCACTCGATA GCAATGCGGC AACCGGTATG
TGGCATATTC GCGCTAACAC GGGCGATAAC CAGTATCGGA TGTGGGATTT CCACGTCGAA
GATTTTATGC CAGAGCGCAT GGCGCTGAAT CTGACCGGTG AGAAAACCCC GCTAACGCCG
AAAGATGAAG TGAAATTCTC CGTGGTGGGG TACTACCTGT ATGGTGCACC TGCTAATGGT
AATACTTTGC AAGGGCAACT TTTCCTGCGC CCACTGCGTG AAGCTGTGTC AGCCTTACCT
GGTTTTGAAT TCGGCGATAT AGCTGCCGAA AATCTTTCCC GCACGCTGGA TGAAGTTCAG
TTGACGCTGG ATGATAAAGG GCGCGGCGAA GTTTCTACAG AAAGCCAGTG GAAGGAAACG
CATTCCCCAT TACAGGTTAT TTTCCAGGGT AGTTTGCTGG AATCGGGCGG TCGCCCGGTG
ACGCGCCGCG CTGAGCAGGC TATCTGGCCT GCCGATGCAT TGCCGGGGAT CCGTCCGCAG
TTCGCCTCGA AATCGGTTTA CGATTATCGC ACTGACAGCA CGGTGAAACA GCCCATTGTT
GATGAAGGCA GTAACGCCGG TTTTGACATC GTTTATAGCG ATGCGCAAGG CGTGAAAAAA
GCCGTGTCGG GCTTGCAGGT GCGCCTGATT CGCGAACGCC GCGATTACTA CTGGAACTGG
TCAGAAGATG AAGGCTGGCA GTCACAGTTT GATCAAAAAG ATCTGATCGA AAATGAACAA
ACTCTGGATC TTCAGGCGGA TGAAACCGGT AAGGTCAGTT TCCCGGTAGA GTGGGGCGCT
TATCGTCTGG AAGTCAAAGC GCCGAATGAA GCGGTCAGTA GCGTGCGTTT CTGGGCTGGC
TATAGCTGGC AGGACAACAG CGACGGGAGC GGTGCCGTGC GACCCGACCG TGTCACGCTG
AAACTGGATA AAGCCAGTTA TCGCCCTGGC GATACCATTA AGTTGCATAT TGCCGCGCCA
ACGGCGGGTA AAGGTTATGC GATGGTCGAG TCCAGTGAAG GGCCGTTGTG GTGGCAAGAG
ATTGATGTTC CGGCTCAAGG GCTGGATCTG ACGATTCCGG TCGATAAAAC CTGGAATCGT
CATGATCTGT ATTTAAGTAC GCTGGTAGTA CGTCCTGGCG ATAAATCTCG CTCCGCGACG
CCAAAACGCG CAGTTGGGGT GTTGCATCTG CCGCTTGGCG ATGAAAACCG TCGCCTCGAT
CTGGCGCTGG AAACACCAGC AAAAATGCGG CCGAATCAAC CATTAACCGT GAAAATTAAA
GCCAGCACTA AAAATGGCGA GAAGCCTAAA CAGGTGAATG TGCTGGTGTC TGCCGTTGAT
AGTGGTGTGC TGAATATTAC TGACTACGTC ACGCCAGATC CGTGGCAGGC GTTCTTTGGT
CAGAAACGCT ATGGCGCAGA CATTTACGAT ATTTACGGTC AGGTTATTGA AGGTCAGGGG
CGTCTGGCAG CTCTGCGTTT CGGTGGCGAT GGTGATGAGC TGAAACGTGG TGGTAAACCG
CCGGTCAATC ACGTCAATAT TGTCGCGCAG CAGGCGCTGC CGGTAACGCT CAACGAACAG
GGCGAAGGCT CGGTTACACT GCCGATTGGC GATTTTAACG GTGAATTACG CGTCATGGCG
CAAGCCTGGA CGGCAGATGA CTTCGGTAGC AACGAAAGCA AAGTGATAGT TGCCGCACCG
GTGATTGCTG AACTGAACAT GCCGCGCTTT ATGGCGAGTG GCGATACCTC GCGTCTGACG
CTGGATATCA CTAATCTTAC CGATAAACCG CAAAAACTGA ACGTTGCCCT GACCGCCAGT
GGTTTGCTTG AACTGGTCAG CGATTCACCC GCAGCCGTTG AATTAGCGCC AGGTGTGCGT
ACTACGCTGT TTATCCCGGT GCGAGCATTG CCGGGTTATG GCGATGGAGA AATTCAGGCC
ACCATTAGCG GGTTAGCGTT ACCGGGTGAA ACCGTTGCCG ATCAGCATAA GCAGTGGAAA
ATCGGCGTCC GTCCGGCGTT CCCGGCACAA ACGGTTAATT ACGGTACGGC GTTACAGCCT
GGTGAGACAT GGGCGATTCC GGCGGATGGA TTGCAAAACT TCTCGCCTGT TACGCTGGAA
GGGCAATTGT TGTTGAGCGG CAAACCACCG CTGAACATTG CACGTTATAT CAAAGAGTTA
AAAGCGTATC CGTACGGCTG TCTTGAGCAA ACCGCCAGCG GCCTGTTCCC GTCACTTTAT
ACCAACGCAG CCCAACTGCA GGCGTTGGGC ATCAAAGGCG ACAGTGATGA GAAACGCCGT
GCATCGGTCG ATATCGGCAT TTCCCGTTTG CTGCAAATGC AACGTGATAA CGGCGGCTTT
GCGCTGTGGG ATAAAAACGG TGACGAAGAG TACTGGCTGA CGGCTTACGT GATGGATTTC
CTGGTCCGCG CAGGCGAACA GGGTTACAGC GTGCCGACAG ACGCCATTAA CCGGGGTAAT
GAGCGTCTGC TGCGCTATTT ACAAGATCCG GGCATGATGT CGATCCCGTA CGCGGATAAT
CTCAAAGCCA GTAAATTCGC CGTACAGTCT TACGCTGCGC TGGTGTTGGC CCGTCAACAA
AAGGCTCCGC TGGGTGCGCT GCGTGAAATC TGGGAGCATC GTGCAGATGC CGCTTCTGGT
TTACCGCTGC TGCAACTTGG CGTTGCGCTG AAAACCATGG GTGATGCAAC GCGTGGTGAA
GAAGCGATTG TGCTGGCGCT GAAAACGCCG AGAAATAGTG ATGAGCGGAT ATGGCTGGGT
GATTACGGTA GTCCACTGCG CGACAACGCG TTAATGCTCT CCTTGCTGGA AGAAAATAAA
CTGCTACCCG ATGAGCAGTA CACTTTGCTG AACACACTTT CGCAGCAGGC GTTTGGTGAA
CGCTGGCTAT CGACGCAGGA AAGTAACGCG GTGTTCCTGG CTGCCCGTAC GATTCAGGAT
TTACCGGGTA AATGGCAGGC GCAAACCTCT TTCTCAGCTG AGCCGCTGAC AGGCGAGAAA
ACGCTAAACA GCAATCTGAA TAGCGATCAA CTTGCCACCT TGCAGGTGAG AAACAGTGGC
GATCAGCCGT TATGGTTGCG TATGGATGCC AGCGGTTATC CGCAATCCGC ACCTTTACCG
GCGAACAATG TGCTGCAAAT CGAGCGTCAT ATTCTTGGTA CTGATGGTAA GAGCAAATCG
CTGGACTCGT TACGTAGCGG CGATCTGGTG CTGGTCTGGT TGCAGGTAAA AGCCAGTAAC
AGCGTGCCGG ATGCGTTAGT CGTGGATCTG CTGCCTGCGG GTCTGGAACT GGAAAATCAG
AATCTGGCGA ACGGTAGCGC CAGCCTGGAG CAAAGTGGTG GCGAAGTGCA AAACTTACTG
AACCAGATGC AGCAGGCGAG CATTAAGCAC ATTGAGTTCC GTGACGATCG CTTTGTGGCG
GCGGTTGCCG TTGATGAATA CCAACCGGTA ACGCTGGTGT ATCTGGCGCG GGCGGTGACG
CCGGGAACGT ATCAGGTACC GCAACCGATG GTGGAATCAA TGTATGTTCC CCAATGGCGG
GCGACCGGCG CGGCTGAAGA TCTGCTGATT GTCCGACCGT AA
|
|---|
| Protein sequence | MKKLRVAACM LMLALAGCDN NDNAPTAVKK DAPSEVTKAA SSENASSAKL SVPERQKLAQ
QSAGKVLTLL DLSEVQLDGA ATLVLTFSIP LDPDQDFSRV IHVVDKKSGK VDGAWELSDN
LKELRLRHLE PKRDLIVTIG KEVKALNNAT FSKDYEKTIT TRDIQPSVGF ASRGSLLPGK
VVEGLPVMAL NVNNVDVNFF RVKPESLPAF ISQWEYRNSL ANWQSDKLLQ MADLVYTGRF
DLNPARNTRE KLLLPLGDIK PLQQAGVYLA VMNQAGRYDY SNPATLFTLS DIGVSAHRYH
NRLDIFTQSL ENGAAQQGIE ISLLNEKGQT LTQATSDAQG HVQLENDKNA ALLLARKDGQ
TTLLDLKLPA LDLAEFNIAG APGYSKQFFM FGPRDLYRPG ETVILNGLLR DADGKALPNQ
PIKLDVIKPD GQVLRSVVSQ PENGLYHFTW PLDSNAATGM WHIRANTGDN QYRMWDFHVE
DFMPERMALN LTGEKTPLTP KDEVKFSVVG YYLYGAPANG NTLQGQLFLR PLREAVSALP
GFEFGDIAAE NLSRTLDEVQ LTLDDKGRGE VSTESQWKET HSPLQVIFQG SLLESGGRPV
TRRAEQAIWP ADALPGIRPQ FASKSVYDYR TDSTVKQPIV DEGSNAGFDI VYSDAQGVKK
AVSGLQVRLI RERRDYYWNW SEDEGWQSQF DQKDLIENEQ TLDLQADETG KVSFPVEWGA
YRLEVKAPNE AVSSVRFWAG YSWQDNSDGS GAVRPDRVTL KLDKASYRPG DTIKLHIAAP
TAGKGYAMVE SSEGPLWWQE IDVPAQGLDL TIPVDKTWNR HDLYLSTLVV RPGDKSRSAT
PKRAVGVLHL PLGDENRRLD LALETPAKMR PNQPLTVKIK ASTKNGEKPK QVNVLVSAVD
SGVLNITDYV TPDPWQAFFG QKRYGADIYD IYGQVIEGQG RLAALRFGGD GDELKRGGKP
PVNHVNIVAQ QALPVTLNEQ GEGSVTLPIG DFNGELRVMA QAWTADDFGS NESKVIVAAP
VIAELNMPRF MASGDTSRLT LDITNLTDKP QKLNVALTAS GLLELVSDSP AAVELAPGVR
TTLFIPVRAL PGYGDGEIQA TISGLALPGE TVADQHKQWK IGVRPAFPAQ TVNYGTALQP
GETWAIPADG LQNFSPVTLE GQLLLSGKPP LNIARYIKEL KAYPYGCLEQ TASGLFPSLY
TNAAQLQALG IKGDSDEKRR ASVDIGISRL LQMQRDNGGF ALWDKNGDEE YWLTAYVMDF
LVRAGEQGYS VPTDAINRGN ERLLRYLQDP GMMSIPYADN LKASKFAVQS YAALVLARQQ
KAPLGALREI WEHRADAASG LPLLQLGVAL KTMGDATRGE EAIVLALKTP RNSDERIWLG
DYGSPLRDNA LMLSLLEENK LLPDEQYTLL NTLSQQAFGE RWLSTQESNA VFLAARTIQD
LPGKWQAQTS FSAEPLTGEK TLNSNLNSDQ LATLQVRNSG DQPLWLRMDA SGYPQSAPLP
ANNVLQIERH ILGTDGKSKS LDSLRSGDLV LVWLQVKASN SVPDALVVDL LPAGLELENQ
NLANGSASLE QSGGEVQNLL NQMQQASIKH IEFRDDRFVA AVAVDEYQPV TLVYLARAVT
PGTYQVPQPM VESMYVPQWR ATGAAEDLLI VRP
|
|---|
| |