Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_2616 |
Symbol | |
ID | 5588945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 2609394 |
End bp | 2610572 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640926273 |
Product | hypothetical protein |
Protein accession | YP_001463667 |
Protein GI | 157157524 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAG TTAGCCAAAC CCAAAAAGCA CCTTCAGCGA ATGTTTCTCT TTTTCGTATC GCCTTCGCGG TTTTCCTCAC TTATATGACC GTCGGTCTGC CGTTACCGGT TATTCCCCTT TTTGTCCATC ATGAACTGGG CTACGGCAAT ACCATGGTCG GGATTGCTGT CGGTGTGCAG TTTCTGGCAA CAGTGTTGAC GCGCGGATAT GCCGGAAAAC TTGCTGATCA GTTTGGCGCA AAGCGCTCTG CCCTGCAGGG AATGCTGGCA TGTGGTCTGG CTGGCGCTTT CTGGTTACTG GCGGCACTAA TGCCCGTCTC TGCACCTGCA AAATTCGCTT TGTTAGTTAT TGGGCGATTA ATTCTTGGTT TTGGCGAAAG CCAGTTGCTG ACGGGAACCT TGTCCTGGGG AGTAGGTCTG GTAGGTCCGA CTCGTTCAGG GAAGGTCATG TCATGGAACG GGATGGCAAT TTATGGCGCA CTTGCTGCCG GTGCGCCGTT GGGATTATTG ATTCATAGCC ATTTTGGTTT TGCGGTGCTG GCAGTGATGA CGATGATTTT ACCGCTGCTG GCCTGGGCAT TTAATGGCAG CGTCCGTAAA GTTCCGCCAC AAACAGGGGA GCGCCCGTCA CTATGGAGTG TGGTCGGGTT AATCTGGAAA CCAGGTATTG GACTGGCGCT GCAGGGCGTC GGTTTTGCTG TGATTGGCAC GTTTATCTCC CTTTACTTTG CCAATAATGG TTGGCCAATG GCTGGTTTTA CATTAACAGC CTTTGGTGGT GCCTTTGTTT TAATGCGCGT GCTGTTTGGC TGGATGCCGG ATCGTTTTGG TGGCGTAAAA GTCGCAATAG CTTCTTTAGC TGTGGAAACC ATTGGCTTAA TTCTGCTATG GCAGGCGCCA GGAGTATGGA TTGCACAGGC AGGCGCTGCA TTAACAGGTG CTGGTTGTTC GTTAATTTTC CCGGCACTTG GTGTGGAAGT AGTAAAACGT GTTCCGGCGC AGGTGCGTGG TACAGCACTG GGCGGCTACG CCGCTTTTCA GGATATCTCC TACGGTATAA CGGGGCCGCT GGCAGGAATG CTGGCGACCT CATTTGGCTA CCCGTCGGTT TTTCTTGCCG GGGCGATATC TGCGGTTGTA GGAATAGTGG TTACGCTGAT CTCTTTTCGG CGTGGTTAA
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Protein sequence | MTAVSQTQKA PSANVSLFRI AFAVFLTYMT VGLPLPVIPL FVHHELGYGN TMVGIAVGVQ FLATVLTRGY AGKLADQFGA KRSALQGMLA CGLAGAFWLL AALMPVSAPA KFALLVIGRL ILGFGESQLL TGTLSWGVGL VGPTRSGKVM SWNGMAIYGA LAAGAPLGLL IHSHFGFAVL AVMTMILPLL AWAFNGSVRK VPPQTGERPS LWSVVGLIWK PGIGLALQGV GFAVIGTFIS LYFANNGWPM AGFTLTAFGG AFVLMRVLFG WMPDRFGGVK VAIASLAVET IGLILLWQAP GVWIAQAGAA LTGAGCSLIF PALGVEVVKR VPAQVRGTAL GGYAAFQDIS YGITGPLAGM LATSFGYPSV FLAGAISAVV GIVVTLISFR RG
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