Gene EcE24377A_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_2616 
Symbol 
ID5588945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp2609394 
End bp2610572 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content52% 
IMG OID640926273 
Producthypothetical protein 
Protein accessionYP_001463667 
Protein GI157157524 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCAG TTAGCCAAAC CCAAAAAGCA CCTTCAGCGA ATGTTTCTCT TTTTCGTATC 
GCCTTCGCGG TTTTCCTCAC TTATATGACC GTCGGTCTGC CGTTACCGGT TATTCCCCTT
TTTGTCCATC ATGAACTGGG CTACGGCAAT ACCATGGTCG GGATTGCTGT CGGTGTGCAG
TTTCTGGCAA CAGTGTTGAC GCGCGGATAT GCCGGAAAAC TTGCTGATCA GTTTGGCGCA
AAGCGCTCTG CCCTGCAGGG AATGCTGGCA TGTGGTCTGG CTGGCGCTTT CTGGTTACTG
GCGGCACTAA TGCCCGTCTC TGCACCTGCA AAATTCGCTT TGTTAGTTAT TGGGCGATTA
ATTCTTGGTT TTGGCGAAAG CCAGTTGCTG ACGGGAACCT TGTCCTGGGG AGTAGGTCTG
GTAGGTCCGA CTCGTTCAGG GAAGGTCATG TCATGGAACG GGATGGCAAT TTATGGCGCA
CTTGCTGCCG GTGCGCCGTT GGGATTATTG ATTCATAGCC ATTTTGGTTT TGCGGTGCTG
GCAGTGATGA CGATGATTTT ACCGCTGCTG GCCTGGGCAT TTAATGGCAG CGTCCGTAAA
GTTCCGCCAC AAACAGGGGA GCGCCCGTCA CTATGGAGTG TGGTCGGGTT AATCTGGAAA
CCAGGTATTG GACTGGCGCT GCAGGGCGTC GGTTTTGCTG TGATTGGCAC GTTTATCTCC
CTTTACTTTG CCAATAATGG TTGGCCAATG GCTGGTTTTA CATTAACAGC CTTTGGTGGT
GCCTTTGTTT TAATGCGCGT GCTGTTTGGC TGGATGCCGG ATCGTTTTGG TGGCGTAAAA
GTCGCAATAG CTTCTTTAGC TGTGGAAACC ATTGGCTTAA TTCTGCTATG GCAGGCGCCA
GGAGTATGGA TTGCACAGGC AGGCGCTGCA TTAACAGGTG CTGGTTGTTC GTTAATTTTC
CCGGCACTTG GTGTGGAAGT AGTAAAACGT GTTCCGGCGC AGGTGCGTGG TACAGCACTG
GGCGGCTACG CCGCTTTTCA GGATATCTCC TACGGTATAA CGGGGCCGCT GGCAGGAATG
CTGGCGACCT CATTTGGCTA CCCGTCGGTT TTTCTTGCCG GGGCGATATC TGCGGTTGTA
GGAATAGTGG TTACGCTGAT CTCTTTTCGG CGTGGTTAA
 
Protein sequence
MTAVSQTQKA PSANVSLFRI AFAVFLTYMT VGLPLPVIPL FVHHELGYGN TMVGIAVGVQ 
FLATVLTRGY AGKLADQFGA KRSALQGMLA CGLAGAFWLL AALMPVSAPA KFALLVIGRL
ILGFGESQLL TGTLSWGVGL VGPTRSGKVM SWNGMAIYGA LAAGAPLGLL IHSHFGFAVL
AVMTMILPLL AWAFNGSVRK VPPQTGERPS LWSVVGLIWK PGIGLALQGV GFAVIGTFIS
LYFANNGWPM AGFTLTAFGG AFVLMRVLFG WMPDRFGGVK VAIASLAVET IGLILLWQAP
GVWIAQAGAA LTGAGCSLIF PALGVEVVKR VPAQVRGTAL GGYAAFQDIS YGITGPLAGM
LATSFGYPSV FLAGAISAVV GIVVTLISFR RG