Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_2562 |
Symbol | menF |
ID | 5590396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 2554205 |
End bp | 2555500 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640926219 |
Product | menaquinone-specific isochorismate synthase |
Protein accession | YP_001463613 |
Protein GI | 157157025 |
COG category | [H] Coenzyme transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1169] Isochorismate synthase |
TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.436798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAATCAC TTACTACGGC GCTGGAAAAT CTACTGCGCC ATTTGTCGCA AGAGATTCCG GCGACACCCG GCATTCGGGT TATCGATATT CCTTTCCCTC TCAAAGACGC TTTTGATGCC TTGAGCTGGC TGGCCAGTCA GCAAACGTAC CCGCAATTCT ACTGGCAACA ACGTAATGGT GATGAAGAAG CTGCCGTCCT GGGCGCGATT ACCCGTTTTA CGTCGTTGGA CCAGGCACAA CGTTTTCTTC GCCAGCACCC GGAACACGCC GACTTACGCA TTTGGGGGCT GAATGCTTTT GACCCGTCGC AGGGCAATTT ACTTTTACCC CGCCTGGAAT GGCGACGCTG TGGCGGTAAA GCCACGCTGC GGCTGACGCT ATTCAGCGAA AGCTCCCTTC AGCACGATGC GATTCAGGCA AAAGAATTTA TCGCCACACT GGTGAGTATC AAGCCCTTGC CTGGGTTACA TTTAACCACC ACGCGAGAAC AACACTGGCC GGACAAAACG GGCTGGACGC AATTAATCGA ACTGGCAACG AAAACCATCG CCGAAGGTGA GCTCGACAAA GTGGTGCTCG CTCGGGCAAC TGACCTGCAT TTCGCAAGTC CGGTCAACGC GGCGGCGATG ATGGCTGCCA GTCGTCGACT GAATCTGAAT TGCTACCATT TTTACATGGC CTTTGATGGC GAAACTGCTT TTCTTGGCTC TTCACCGGAA CGGTTATGGC GGCGGCGTGA CAACGCGCTG CGTACTGAAG CGCTGGCGGG AACGGTAGCA AATCATCCTG ATGATAAGCA GGCGCAGCAG TTAGGTGAGT GGCTGATGGC GGATGATAAA AACCAGCGCG AGAACATGCT GGTGGTGGAA GATATCTGCC AACGATTACA GGCCGATACC CAGACGCTGG ATGTTTTACC GCCGCAGGTA CTGCGTCTGC GTAAAGTGCA GCATCTTCGC CGCTGTATCT GGACTTCACT CAACAAAGCG GATGATGTGA TCTGTTTACA TCAGTTGCAG CCAACGGCAG CAGTTGCTGG CTTACCGCGC GATCTGGCGC GACAGTTTAT CGCCCGTCAC GAACCGTTCA CCCGAGAATG GTACGCCGGT TCTGCGGGCT ATCTCTCATT ACAACAAAGC GAATTCTGCG TTTCCCTGCG CTCAGCAAAA ATTAGCGGCA ATGTCGTGCG ATTATATGCT GGCGCGGGCA TTGTCCGTGG TTCCGACCCC GAGCAAGAGT GGCAGGAAAT CGACAACAAA GCGGCAGGGC TGCGTACTTT ATTACAGATG GAATAG
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Protein sequence | MQSLTTALEN LLRHLSQEIP ATPGIRVIDI PFPLKDAFDA LSWLASQQTY PQFYWQQRNG DEEAAVLGAI TRFTSLDQAQ RFLRQHPEHA DLRIWGLNAF DPSQGNLLLP RLEWRRCGGK ATLRLTLFSE SSLQHDAIQA KEFIATLVSI KPLPGLHLTT TREQHWPDKT GWTQLIELAT KTIAEGELDK VVLARATDLH FASPVNAAAM MAASRRLNLN CYHFYMAFDG ETAFLGSSPE RLWRRRDNAL RTEALAGTVA NHPDDKQAQQ LGEWLMADDK NQRENMLVVE DICQRLQADT QTLDVLPPQV LRLRKVQHLR RCIWTSLNKA DDVICLHQLQ PTAAVAGLPR DLARQFIARH EPFTREWYAG SAGYLSLQQS EFCVSLRSAK ISGNVVRLYA GAGIVRGSDP EQEWQEIDNK AAGLRTLLQM E
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