Gene EcE24377A_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_2548 
SymbolarnB 
ID5588184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp2540785 
End bp2541924 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content52% 
IMG OID640926206 
ProductUDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 
Protein accessionYP_001463600 
Protein GI157155035 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAT TTTTGCCTTT TTCGCGACCA GCAATGGGCG TGGAGGAACT CGCTGCAGTT 
AAAGAGGTTC TCGAATCCGG TTGGATCACA ACCGGTCCGA AGAATCAGGC GCTTGAGCAA
GCCTTTTGCC AGTTGACGGG AAATCAGCAT GCCATCGCGG TCAGTTCAGC CACCGCCGGA
ATGCATATCA CGCTAATGGC GTTGGAAATT GGCAAGGGCG ATGAAGTGAT TACGCCTTCC
CTGACCTGGG TTTCAACCCT CAATATGATT TCCTTGTTGG GTGCAACGCC GGTAATGGTG
GATGTCGACC GCGATACGCT GATGGTCACG CCTGAAGCGA TCGAGTCAGC CATAACGCCA
CGCACTAAAG CCATCATTCC GGTGCATTAT GCCGGTGCGC CAGCAGATAT TGACGCCATT
CGCGCCATTG GCGAACGTTA CGGCATCGCA GTTATCGAAG ATGCTGCCCA TGCCGTCGGT
ACGTATTACA AAGGGCGACA TATTGGCGCA AAAGGTACCG CTATTTTTTC ATTTCATGCC
ATTAAAAATA TTACCTGTGC GGAAGGTGGC CTGATTGTAA CTGATAATGA AAACCTTGCC
CGCCAGCTAC GGATGCTGAA ATTTCACGGT CTGGGTGTCG ATGCCTATGA CAGACAAACC
TGGGGCCGTG CACCGCAGGC TGAAGTCTTA ACACCGGGCT ATAAGTACAA TCTGACCGAT
ATTAACGCCG CAATTGCCCT GACACAGTTA GCAAAATTAG AGCACCTCAA CACCCGTCGG
CGCGAAATTG CCCAGCAATA TCAGCAAGCA CTGGCAGCTC TCCCCTTTCA GCCATTAAGC
CTTCCCGCCT GGCCGCACGT TCACGCCTGG CATCTGTTTA TTATTCGTGT CGATGAACAA
CGTTGTGGTA TCAGTCGCGA TGCGTTGATG GAAGCGTTAA AAGAAAGAGG CATTGGTACC
GGGTTACATT TCCGCGCCGC TCACACACAA AAATATTATC GCGAGCGTTT TCCCACGCTG
TCGTTACCGA ATACCGAATG GAATAGCGAA CGCATCTGTT CTTTGCCGCT GTTCCCGGAT
ATGACTACCG CCGATGCCGA CCGTGTCATC ACAGCCCTTC AGCAACTCGC AGGACAATAA
 
Protein sequence
MSEFLPFSRP AMGVEELAAV KEVLESGWIT TGPKNQALEQ AFCQLTGNQH AIAVSSATAG 
MHITLMALEI GKGDEVITPS LTWVSTLNMI SLLGATPVMV DVDRDTLMVT PEAIESAITP
RTKAIIPVHY AGAPADIDAI RAIGERYGIA VIEDAAHAVG TYYKGRHIGA KGTAIFSFHA
IKNITCAEGG LIVTDNENLA RQLRMLKFHG LGVDAYDRQT WGRAPQAEVL TPGYKYNLTD
INAAIALTQL AKLEHLNTRR REIAQQYQQA LAALPFQPLS LPAWPHVHAW HLFIIRVDEQ
RCGISRDALM EALKERGIGT GLHFRAAHTQ KYYRERFPTL SLPNTEWNSE RICSLPLFPD
MTTADADRVI TALQQLAGQ