Gene EcE24377A_2511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_2511 
SymbolalkB 
ID5589150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand- 
Start bp2495040 
End bp2495690 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content53% 
IMG OID640926169 
Productalkylated DNA repair protein AlkB 
Protein accessionYP_001463563 
Protein GI157156371 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID[TIGR00568] DNA alkylation damage repair protein AlkB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0516061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGATC TGTTTGCCGA TGCTGAACCG TGGCAAGAGC CACTGGCGGC TGGAGCGGTA 
ATTTTGCACC GTTTTGCTTT TAACGCTGCG GAGCAACTGA TCCGCGATAT TAATAACGTT 
GCCAGCCAGT CGCCGTTTCG CCAGATGGTC ACCCCCGGGG GATATACCAT GTCGGTGGCG 
ATGACCAACT GTGGGCATCT GGGCTGGACG AGCCATCGGC AAGGTTATCT CTATTCGCCC 
ATTGATCCGC AAACAAATAA ACCGTGGCCC GCCATGCCAC AGAGTTTTCA TAATTTATGT 
CAACGTGCGG CTACGGCGGC GGGCTATCCA GATTTCCAGC CAGATGCTTG TCTTATCAAC 
CGCTACGCTC CTGGCGCGAA ACTGTCGCTG CATCAGGATA AAGACGAACC GGATCTGCGC 
GCGCCAATTG TTTCTGTTTC TCTGGGCTTA CCCGCGATTT TTCAATTTGG TGGCCTGAAA 
CGTAATGATC CGCTCAAACG TTTGTTGTTG GAACATGGCG ATGTGGTGGT ATGGGGCGGT 
GAATCGCGGC TGTTTTATCA CGGTATTCAA CCGTTGAAAG CGGGGTTTCA TCCACTCACC 
ACCGACTGCC GCTACAACCT GACATTCCGT CAGGCAGGTA AAAAAGAATA A
 
Protein sequence
MLDLFADAEP WQEPLAAGAV ILHRFAFNAA EQLIRDINNV ASQSPFRQMV TPGGYTMSVA 
MTNCGHLGWT SHRQGYLYSP IDPQTNKPWP AMPQSFHNLC QRAATAAGYP DFQPDACLIN 
RYAPGAKLSL HQDKDEPDLR APIVSVSLGL PAIFQFGGLK RNDPLKRLLL EHGDVVVWGG 
ESRLFYHGIQ PLKAGFHPLT TDCRYNLTFR QAGKKE