| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2501 |
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| Symbol | napC |
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| ID | 5588581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 2484572 |
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| End bp | 2485174 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640926159 |
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| Product | cytochrome c-type protein NapC |
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| Protein accession | YP_001463553 |
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| Protein GI | 157154917 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAAATT CTGACCGTAA GCCTGGTCTG ATTAAGCGCC TGTGGAAATG GTGGCGTACC
CCCAGCCGTC TGGCGCTGGG GACGCTGCTG TTGATCGGTT TTGTTGGCGG CATCGTCTTC
TGGGGTGGCT TTAACACCGG GATGGAAAAA GCCAATACCG AAGAGTTCTG CATTAGCTGC
CACGAAATGC GCAACACGGT GTATCAGGAA TACATGGATT CCGTGCACTA CAACAACCGT
AGCGGCGTCC GTGCGACCTG TCCGGATTGT CACGTTCCGC ACGAGTTTGT GCCGAAGATG
ATACGCAAGC TCAAAGCAAG TAAAGAGCTG TATGGTAAAA TTTTTGGCGT TATTGACACG
CCGCAGAAAT TTGAAGCTCA TCGTCTGACG ATGGCACAGA ATGAGTGGCG GCGCATGAAG
GACAATAACT CGCAGGAGTG CCGTAACTGT CACAACTTCG AGTATATGGA TACAACCGCC
CAGAAATCGG TTGCCGCGAA GATGCATGAC CAGGCGGTGA AAGATGGGCA AACCTGTATT
GATTGCCATA AAGGGATAGC GCACAAGCTG CCCGATATGC GTGAAGTCGA GCCAGGTTTT
TAA
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| Protein sequence | MGNSDRKPGL IKRLWKWWRT PSRLALGTLL LIGFVGGIVF WGGFNTGMEK ANTEEFCISC
HEMRNTVYQE YMDSVHYNNR SGVRATCPDC HVPHEFVPKM IRKLKASKEL YGKIFGVIDT
PQKFEAHRLT MAQNEWRRMK DNNSQECRNC HNFEYMDTTA QKSVAAKMHD QAVKDGQTCI
DCHKGIAHKL PDMREVEPGF
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