Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_2481 |
Symbol | rsuA |
ID | 5589045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 2468077 |
End bp | 2468772 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640926141 |
Product | 16S rRNA pseudouridylate synthase A |
Protein accession | YP_001463536 |
Protein GI | 157155587 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0457418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACTTG ATAAATTTAT CGCACAGCAA CTCGGCGTTA GCCGTGCTAT TGCCGGGCGT GAAATCCGCG GCAATCGTGT CACCGTCGAT GGCGAAATTG TTCGTAATGC AGCGTTCAAA CTGCTTCCTG AACATGATGT CGCTTACGAT GGCAACCCGC TGGCGCAGCA ACATGGTCCA CGTTACTTCA TGCTCAATAA GCCTCAGGGC TATGTTTGCT CCACGGACGA CCCTGATCAC CCAACGGTGC TCTATTTTCT GGATGAACCG GTAGCCTGGA AACTGCACGC CGCAGGACGT CTGGATATCG ATACCACCGG TCTGGTGCTG ATGACTGATG ATGGTCAGTG GTCGCACCGC ATTACTTCTC CGCGCCATCA TTGCGAGAAG ACCTATCTGG TGACACTGGA ATCACCTGTA GCTGACGATA CGGCAGAGCA ATTTGCTAAA GGCGTGCAGC TGCATAACGA AAAAGATCTC ACTAAGCCTG CGGTGCTGGA AGTGATTACC CCAACGCAGG TTCGTCTGAC CATCAGCGAA GGGCGTTATC ATCAGGTGAA ACGCATGTTC GCCGCCGTGG GTAACCACGT GGTTGAGCTG CATCGTGAAC GTATTGGCGG TATTACGCTG GATGCTGATT TAGCCCCCGG TGAATATCGT CCGTTAACTG AAGAAGAAAT TGCCAGCGTC GTCTAA
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Protein sequence | MRLDKFIAQQ LGVSRAIAGR EIRGNRVTVD GEIVRNAAFK LLPEHDVAYD GNPLAQQHGP RYFMLNKPQG YVCSTDDPDH PTVLYFLDEP VAWKLHAAGR LDIDTTGLVL MTDDGQWSHR ITSPRHHCEK TYLVTLESPV ADDTAEQFAK GVQLHNEKDL TKPAVLEVIT PTQVRLTISE GRYHQVKRMF AAVGNHVVEL HRERIGGITL DADLAPGEYR PLTEEEIASV V
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