Gene EcE24377A_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_2429 
SymboldusC 
ID5590349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp2411860 
End bp2412807 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content54% 
IMG OID640926091 
ProducttRNA-dihydrouridine synthase C 
Protein accessionYP_001463486 
Protein GI157157351 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGTGT TACTGGCGCC GATGGAGGGT GTGCTTGACT CTCTGGTGCG TGAATTGCTG 
ACCGAAGTTA ACGACTACGA TCTGTGCATC ACCGAGTTTG TCCGCGTGGT GGATCAACTG
CTGCCGGTAA AAGTCTTTCA TCGCATTTGC CCTGAGCTAC AAAACGCCAG CCGGACACCA
TCCGGTACGC TGGTGCGCGT TCAGTTGTTA GGTCAGTTCC CACAATGGCT GGCAGAGAAC
GCCGCCCGTG CGGTGGAATT AGGTTCCTGG GGCGTGGATC TCAATTGCGG CTGCCCGTCG
AAAACGGTTA ACGGCAGCGG CGGCGGGGCG ACGTTACTCA AAGATCCTGA ACTCATCTAC
CAGGGTGCAA AAGCGACGCG TGAAGCTGTA CCAGCGCATT TGCCCGTCAG CGTAAAAGTG
CGTCTGGGCT GGGACAGCGG TGAGAAGAAA TTTGAAATCG CCGATGCGGT TCAACAGGCT
GGCGCTACGG AGCTGGTGGT GCATGGGCGG ACAAAAGAGC AGGGTTACCG CGCGGAGCAT
ATTGACTGGC AGGCGATTGG CGAGATTCGC CAGCGGCTGA ATATTCCGGT GATTGCCAAC
GGTGAAATCT GGGACTGGCA GAGTGCGCAA CAATGCATGG CGATCAGCGG CTGCGACGCA
GTGATGATTG GTCGCGGGGC GCTCAATATT CCCAACCTGA GCCGGGTAGT AAAATATAAC
GAACCGCGAA TGCCGTGGCC GGAGGTGGTT GCTTTGCTGC AAAAATATAC CCGTCTGGAA
AAGCAGGGCG ATACCGGGTT ATATCACGTT GCGCGGATTA AACAGTGGTT GAGTTATTTG
CGTAAAGAAT ACGATGAAGC AACGGGATTA TTTCAGCATG TTCGGGTGTT GAATAATTCC
CCTGATATTG CAAGGGCTAT TCAGGCAATT GATATCGAGA AACTCTAA
 
Protein sequence
MRVLLAPMEG VLDSLVRELL TEVNDYDLCI TEFVRVVDQL LPVKVFHRIC PELQNASRTP 
SGTLVRVQLL GQFPQWLAEN AARAVELGSW GVDLNCGCPS KTVNGSGGGA TLLKDPELIY
QGAKATREAV PAHLPVSVKV RLGWDSGEKK FEIADAVQQA GATELVVHGR TKEQGYRAEH
IDWQAIGEIR QRLNIPVIAN GEIWDWQSAQ QCMAISGCDA VMIGRGALNI PNLSRVVKYN
EPRMPWPEVV ALLQKYTRLE KQGDTGLYHV ARIKQWLSYL RKEYDEATGL FQHVRVLNNS
PDIARAIQAI DIEKL