| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2428 |
|---|
| Symbol | |
|---|
| ID | 5589555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 2409744 |
|---|
| End bp | 2411180 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640926090 |
|---|
| Product | multidrug resistance outer membrane protein MdtQ |
|---|
| Protein accession | YP_001463485 |
|---|
| Protein GI | 157159177 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGTG ATTCCTTTTA TCCCGCCATC GCCTGTTTTC CGCTGTTACT GATGCTGGCC
GGGTGTGCGC CTATGCATGA AACCCGCCAG GCGTTAAGCC AGCAAACGCC CGCTGCACAA
GTTGACACCG CATTACCCAC GGCGCTGAAA AATGGTTGGC CAGACAGCCA ATGGTGGCTG
GAGTATCACG ATAATCAACT CACGTCCTTA ATTAACAATG CACTACAGAA CGCACCGGAT
ATGCAGGTGG CTGAACAGCG CATTCAGCTA GCTGAAGCCC AGGCGAAGGC AATTGCTACT
CAGGATGGTC CGCAGATCGA CTTTTCTGCG GATATGGAGC GGCAAAAAAT GTCGGCAGAA
GGCTTAATGG GGCCGTTTGC TCTGAACGAT CCGGCCGCAG GTACGACCGG TCCGTGGTAC
ACCAACGGAA CTTTTGGCTT AACGGCGGGC TGGCATCTCG ATATCTGGGG AAAGAATCGG
GCGGAGGTTA CTGCCCGCCT GGGTACGGTT AAAGCACGGG CGGCGGAACG CGAGCAAACC
CGCCAATTGC TGGCTGGCAG CGTAGCCCGC CTGTACTGGG AGTGGCAAAC CCAGGCGGCG
TTAAACACGG TCTTGCAGCA AATAGAAAAA GAGCAGAACA CCATTATCGC GACCGATCGC
CAGCTATATC AGAACGGGAT TACTTCTTCA GTTGAAGGTG TGGAAACCGA TATTAATGCC
AGCAAAACCC GGCAGCAGCT CAACGATGTC GCGGGGAAAA TGAAAATTAT TGAGGCACGG
TTAAGCGCAC TTACAAATAA CCAGACAAAG TCATTGAAGC TTAAACCGGT CGCGTTGCCG
AAAGTGGCAA GCCAGCTTCC TGATGAACTG GGGTACTCCT TACTGGCCCG GCGGGCAGAT
TTGCAGGCGG CGCACTGGTA CGTTGAGTCA TCGCTAAGCA CCATTGATGC GGCAAAAGCG
GCATTTTATC CTGACATCAA CCTGATGGCC TTCCTGCAAC AGGATGCGTT GCACTTAAGC
GATCTGTTCC GTCATTCCGC GCAGCAAATG GGCGTTACGG CAGGCCTGAC GCTACCCATT
TTCGATAGTG GTCGTCTTAA CGCCAATCTC GATATCGCAA AAGCCGAAAG CAACTTGTCT
ATCGCCAGCT ACAACAAAGC GGTGGTTGAA GCGGTGAATG ACGTGGCGCG GGCAGCCAGT
CAGGTTCAGA CACTTGCGGA GAAAAACCAG CATCAGGCGC AAATTGAGCG CGATGCCTTG
CGTGTGGTAG GTCTTGCGCA GGCGCGCTTT AACGCGGGCA TCATTGCTGG TTCCCGCGTC
AGCGAAGCCA GAATCCCCGC GCTGCGTGAG CGGGCCAATG GCCTGTTATT GCAAGGGCAG
TGGCTGGATG CTTCCATTCA ACTCACTGGT GCGTTGGGCG GGGGTTACAA ACGCTGA
|
|---|
| Protein sequence | MNRDSFYPAI ACFPLLLMLA GCAPMHETRQ ALSQQTPAAQ VDTALPTALK NGWPDSQWWL
EYHDNQLTSL INNALQNAPD MQVAEQRIQL AEAQAKAIAT QDGPQIDFSA DMERQKMSAE
GLMGPFALND PAAGTTGPWY TNGTFGLTAG WHLDIWGKNR AEVTARLGTV KARAAEREQT
RQLLAGSVAR LYWEWQTQAA LNTVLQQIEK EQNTIIATDR QLYQNGITSS VEGVETDINA
SKTRQQLNDV AGKMKIIEAR LSALTNNQTK SLKLKPVALP KVASQLPDEL GYSLLARRAD
LQAAHWYVES SLSTIDAAKA AFYPDINLMA FLQQDALHLS DLFRHSAQQM GVTAGLTLPI
FDSGRLNANL DIAKAESNLS IASYNKAVVE AVNDVARAAS QVQTLAEKNQ HQAQIERDAL
RVVGLAQARF NAGIIAGSRV SEARIPALRE RANGLLLQGQ WLDASIQLTG ALGGGYKR
|
|---|
| |