Gene EcE24377A_2419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_2419 
Symbol 
ID5589601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp2399780 
End bp2400937 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content57% 
IMG OID640926081 
Productquaternary amine ABC transporter permease 
Protein accessionYP_001463476 
Protein GI157156192 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTTATC TACGTATTAA TCCTGTTCTG GCGCTGCTGC TGTTGCTGAC GGTAATCGCA 
GCGGCGCTGC CGTTTATCAG TTACGCGCCT AATCGTTTAG TCTCGGGTGA AGGGCGACAT
CTCTGGCAGC TGTGGCCGCA AACGATCTGG ATGCTGGTGG GCGTTGGTTG CGCCTGGCTG
ACAGCCTGTT TTATTCCCGG TAAAAAAGGC AGCATTTGTG CACTCATTCT GGCGCAATTC
GTCTTCGTAT TGCTGGTGTG GGGAGCTGGA AAGGCGGCGA CCCAACTGGC GCAAAATGGC
AGTGCGCTGG CGCGTACCAG CCTCGGCAGT GGTTTCTGGC TGGCTGCGGC GCTGGCATTG
CTGGCCTGTA GCGATGCCAT CCGCCGAATC TCCACGCATC CGCTGTGGCG CTGGTTGTTG
CATATGCAGA TTGCCATTAT TCCGCTGTGG TTGCTGTACT CCGGCACGCT TAACGATCTC
TCACTAATGA AAGAATACGC CAACCGTCAG GATGTGTTTG ACGACGCGCT GGCACAACAT
CTGACGTTGC TGTTTGGTGC GGTGCTGCCT GCGTTAGTGA TTGGTGTGCC GTTGGGCATC
TGGTGCTACT TTTCCACTGC GCGGCAGGGG GCAATTTTTT CTCTGCTCAA TGTCATTCAG
ACCGTGCCTT CGGTGGCGCT CTTTGGCCTG TTGATTGCGC CGCTTGCCGC GCTGGTTACG
GCCTTTCCGT GGCTGGGGAA GCTCGGCATA GCAGGAACCG GAATGACACC CGCACTGATT
GCGCTGGTGC TCTATGCCTT GCTGCCGCTG GTGCGCGGCG TGGTAGTCGG TTTGAACCAG
ATCCCGCGCG ATGTGCTGGA GAGCGCCAGA GCGATGGGGA TGAGCGGGGC GCAGCGTTTC
CTGCATGTTC AGTTACCGCT GGCGTTACCG GTATTTCTGC GCAGCCTGCG GGTGGTGATG
GTGCAAACTG TAGGTATGGC GGTGATTGCG GCGTTAATCG GCGCAGGCGG TTTTGGTGCG
CTGGTTTTCC AGGGGCTGCT AAGCAGCGCC ATTGATTTAG TGTTGCTGGG GGTGATCCCG
GTAATTGTTC TGGCGGTGCT GATCGATGCC CTGTTCGATT TGCTTATCGC ACTGCTGAAG
GTGAAACGTA ATGATTGA
 
Protein sequence
MTYLRINPVL ALLLLLTVIA AALPFISYAP NRLVSGEGRH LWQLWPQTIW MLVGVGCAWL 
TACFIPGKKG SICALILAQF VFVLLVWGAG KAATQLAQNG SALARTSLGS GFWLAAALAL
LACSDAIRRI STHPLWRWLL HMQIAIIPLW LLYSGTLNDL SLMKEYANRQ DVFDDALAQH
LTLLFGAVLP ALVIGVPLGI WCYFSTARQG AIFSLLNVIQ TVPSVALFGL LIAPLAALVT
AFPWLGKLGI AGTGMTPALI ALVLYALLPL VRGVVVGLNQ IPRDVLESAR AMGMSGAQRF
LHVQLPLALP VFLRSLRVVM VQTVGMAVIA ALIGAGGFGA LVFQGLLSSA IDLVLLGVIP
VIVLAVLIDA LFDLLIALLK VKRND