| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2379 |
|---|
| Symbol | gatD |
|---|
| ID | 5588829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 2353337 |
|---|
| End bp | 2354377 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640926044 |
|---|
| Product | galactitol-1-phosphate dehydrogenase |
|---|
| Protein accession | YP_001463439 |
|---|
| Protein GI | 157157813 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAG TGGTGAATGA TACTGATGGT ATCGTGCGCG TTGCAGAAAG CGTCATTCCT
GAAATTAAAC ATCAGGATGA GGTGCGGGTA AAAATTGCCA GCTCGGGCTT ATGTGGTTCC
GATTTACCCA GGATATTTAA AAATGGTGCA CATTATTATC CAATAACGTT AGGCCATGAA
TTTAGCGGCT ATATTGATGC GGTGGGATCC GGTGTTGATG ATTTACATCC TGGCGATGCG
GTTGCCTGTG TGCCGTTATT ACCCTGTTTT ACTTGTCCAG AGTGTTTGAA AGGGTTTTAT
TCCCAGTGCG CAAAATATGA TTTTATTGGC TCACGGCGTG ATGGTGGATT TGCCGAATAT
ATTGTCGTTA AGCGGAAAAA TGTCTTTGCT CTACCTACTG ATATGCCTAT TGAGGATGGG
GCTTTTATTG AACCGATTAC CGTTGGCTTG CATGCTTTTC ATTTAGCGCA AGGTTGTGAG
AATAAAAACG TTATTATTAT TGGTGCCGGA ACCATTGGCC TGCTGGCCAT TCAGTGCGCT
GTCGCGCTGG GAGCAAAGAG TGTGACGGCG ATCGACATTA GTTCAGAAAA ACTGGCACTG
GCAAAATCTT TCGGTGCGAT GCAAACATTT AACAGTAGCG AAATGAGCGC GCCGCAAATG
CAGAGCGTTT TACGCGAACT GCGCTTTAAT CAGCTTATCC TCGAGACGGC TGGCGTACCG
CAAACTGTCG AACTGGCGGT AGAGATTGCC GGTCCTCATG CCCAACTGGC GCTGGTGGGC
ACGTTGCATC AGGATCTGCA TTTAACATCG GCAACGTTTG GCAAAATATT GCGTAAAGAG
CTGACGGTTA TCGGCAGTTG GATGAACTAC TCCAGCCCTT GGCCGGGGCA GGAGTGGGAA
ACGGCGAGCC GGTTGCTGAC AGAACGTAAG TTAAGCCTGG AGCCATTAAT CGCTCACCGT
GGAAGCTTTG AAAGCTTCGC CCAGGCGGTG CGTGACATCG CTCGTAATGC CATGCCGGGC
AAAGTGTTGC TCATTCCCTG A
|
|---|
| Protein sequence | MKSVVNDTDG IVRVAESVIP EIKHQDEVRV KIASSGLCGS DLPRIFKNGA HYYPITLGHE
FSGYIDAVGS GVDDLHPGDA VACVPLLPCF TCPECLKGFY SQCAKYDFIG SRRDGGFAEY
IVVKRKNVFA LPTDMPIEDG AFIEPITVGL HAFHLAQGCE NKNVIIIGAG TIGLLAIQCA
VALGAKSVTA IDISSEKLAL AKSFGAMQTF NSSEMSAPQM QSVLRELRFN QLILETAGVP
QTVELAVEIA GPHAQLALVG TLHQDLHLTS ATFGKILRKE LTVIGSWMNY SSPWPGQEWE
TASRLLTERK LSLEPLIAHR GSFESFAQAV RDIARNAMPG KVLLIP
|
|---|
| |