| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2367 |
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| Symbol | mdtB |
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| ID | 5590006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 2337899 |
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| End bp | 2341021 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640926032 |
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| Product | multidrug efflux system subunit MdtB |
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| Protein accession | YP_001463427 |
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| Protein GI | 157158287 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGTGT TACCCCCGAG CAGCACAGGC GGCCCGTCGC GCCTGTTTAT TATGCGTCCT
GTCGCCACCA CGCTGCTGAT GGTGGCGATC TTACTCGCCG GAATTATCGG TTATCGCGCC
CTGCCCGTTT CGGCGCTGCC GGAAGTGGAT TATCCGACTA TTCAGGTGGT TACACTCTAC
CCTGGCGCCA GCCCGGATGT GATGACCTCT GCCGTTACCG CGCCGCTCGA ACGCCAGTTC
GGGCAGATGT CTGGCCTGAA ACAGATGTCG TCGCAAAGTT CCGGCGGTGC GTCAGTTATC
ACTTTGCAGT TCCAGCTAAC ATTACCGCTC GATGTCGCCG AGCAGGAAGT GCAGGCCGCG
ATTAACGCTG CGACCAACTT GTTGCCGAGC GATCTGCCTA ACCCGCCGGT TTACAGCAAA
GTGAACCCGG CAGATCCGCC GATCATGACG CTCGCCGTCA CCTCAACCGC CATGCCGATG
ACCCAGGTAG AAGATATGGT GGAAACCCGC GTCGCGCAGA AAATCTCGCA GATTTCCGGC
GTCGGCCTGG TGACGCTTTC CGGCGGTCAG CGTCCGGCTG TTCGCGTCAA ACTTAACGCT
CAGGCGATTG CCGCCCTCGG CCTGACCAGC GAAACCGTGC GCACCGCCAT TACCGGCGCT
AACGTTAACT CGGCAAAAGG TAGCCTCGAC GGCCCTTCCC GTGCGGTCAC GCTTTCCGCG
AACGACCAGA TGCAATCCGC CGAAGAGTAT CGCCAGCTAA TCATCGCCTA CCAGAACGGC
GCGCCAATTC GTCTGGGCGA TGTCGCAACT GTAGAGCAAG GTGCAGAAAA CAGCTGGCTC
GGCGCGTGGG CGAACAAAGA ACAGGCCATT GTGATGAATG TTCAGCGCCA GCCCGGTGCT
AACATTATCT CCACCGCCGA CAGCATTCGG CAGATGCTGC CACAGCTCAC TGAGAGTCTG
CCGAAATCGG TGAAGGTGAC AGTGCTTTCC GATCGCACCA CCAATATCCG CGCATCCGTC
GATGATACTC AGTTTGAATT GATGATGGCT ATCGCGCTGG TAGTCATGAT TATCTACCTG
TTTTTGCGCA ATATTCCGGC GACCATCATT CCCGGTGTTG CTGTACCGCT GTCGTTAATC
GGCACTTTCG CGGTTATGGT GTTTCTCGAT TTTTCAATCA ATAACCTGAC ACTGATGGCG
TTAACTATCG CCACCGGATT CGTGGTCGAT GACGCCATCG TGGTGATCGA AAACATTTCC
CGCTATATCG AAAAAGGCGA AAAACCGTTG GCGGCGGCGC TCAAGGGCGC AGGTGAAATC
GGCTTTACCA TTATCTCGCT GACCTTCTCA CTGATTGCGG TGTTGATCCC ACTGCTGTTT
ATGGGCGATA TCGTCGGGCG ACTGTTCCGC GAATTTGCTA TTACGCTGGC GGTAGCGATT
TTGATCTCAG CGGTGGTGTC GCTGACCCTG ACACCGATGA TGTGCGCGCG GATGCTCAGC
CAGGAGTCGT TGCGTAAACA GAACCGCTTC TCCCGTGCCT CGGAAAAAAT GTTCGACAGG
ATAATCGCCG CCTATGGTCG TGGACTGGCG AAAGTGCTGA ATCATCCGTG GCTGACCTTA
AGCGTGGCAC TCAGCACGCT GCTGCTTAGC GTGCTGCTGT GGGTGTTCAT TCCGAAAGGT
TTCTTCCCGG TACAGGACAA TGGCATTATT CAGGGCACTT TGCAGGCACC GCAATCCAGC
TCCTTTGCCA ATATGGCCCA GCGACAACGC CAGGTCGCGG ACGTGATTTT GCAGGATCCG
GCAGTGCAAA GCCTGACCTC ATTTGTTGGC GTTGATGGCA CTAACCCGTC GCTGAACAGT
GCACGTTTAC AAATCAACCT CAAACCGTTG GATGAACGTG ATGATCGGGT GCAAAAAGTC
ATCGCCCGTC TGCAAACGGC GGTAGATAAA GTGCCGGGCG TCGATCTCTT CCTGCAACCA
ACGCAGGATC TGACTATTGA TACTCAGGTC AGCCGCACCC AGTACCAGTT TACCTTGCAG
GCCACCTCAC TGGATGCGCT CAGTACCTGG GTGCCACAGT TGATGGAAAA ACTCCAGCAA
CTGCCACAGC TTTCTGATGT CTCCAGCGAC TGGCAGGACA AAGGGCTGGT GGCGTATGTC
AATGTTGATC GCGACAGCGC CAGCCGTCTG GGGATCAGCA TGGCGGATGT CGATAACGCC
CTGTACAACG CGTTTGGTCA GCGGCTGATT TCCACTATTT ATACTCAGGC CAACCAGTAT
CGCGTGGTGC TGGAGCACAA CACCGAAAAT ACTCCTGGCC TCGCGGCGCT GGATACCATT
CGCCTGACCA GCAGCGACGG CGGCGTGGTG CCGCTAAGCT CAATTGCCAA AATTGAGCAG
CGTTTTGCGC CGCTTTCCAT CAACCATCTG GATCAGTTCC CGGTAACGAC CATCTCCTTT
AACGTGCCGG ATAACTATTC GCTGGGCGAT GCGGTGCAGG CGATTATGGA CACCGAAAAG
ACGCTGAATC TGCCGGTGGA TATCACCACG CAATTTCAGG GCAGCACCCT CGCCTTCCAG
TCGGCGCTGG GCAGCACTGT CTGGCTGATT GTCGCGGCGG TGGTGGCGAT GTATATCGTG
CTCGGCATTC TGTACGAGAG CTTTATTCAC CCGATCACCA TTCTCTCGAC GCTACCCACC
GCAGGGGTCG GCGCGCTGCT GGCATTAATG ATTGCCGGTA GCGAACTGGA TGTGATTGCG
ATTATCGGCA TTATTTTGCT GATCGGTATT GTGAAGAAGA ACGCCATCAT GATGATCGAC
TTCGCGCTGG CTGCTGAGCG CGAGCAAGGC ATGTCGCCGC GCGATGCAAT CTACCAGGCT
TGTCTGTTGC GTTTTCGTCC GATCCTGATG ACCACCCTGG CGGCTCTGCT TGGCGCGCTG
CCGCTGATGT TGAGTACCGG GGTCGGCGCG GAACTGCGTC GTCCGTTAGG TATCGGCATG
GTCGGCGGTC TGATTGTCAG CCAGGTGCTG ACGCTGTTCA CCACGCCGGT GATTTATCTG
CTGTTCGACC GCCTGGCATT GTGGACCAAA AGTCGCTTTG CTCGCCATGA AGAGGAGGCG
TAA
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| Protein sequence | MQVLPPSSTG GPSRLFIMRP VATTLLMVAI LLAGIIGYRA LPVSALPEVD YPTIQVVTLY
PGASPDVMTS AVTAPLERQF GQMSGLKQMS SQSSGGASVI TLQFQLTLPL DVAEQEVQAA
INAATNLLPS DLPNPPVYSK VNPADPPIMT LAVTSTAMPM TQVEDMVETR VAQKISQISG
VGLVTLSGGQ RPAVRVKLNA QAIAALGLTS ETVRTAITGA NVNSAKGSLD GPSRAVTLSA
NDQMQSAEEY RQLIIAYQNG APIRLGDVAT VEQGAENSWL GAWANKEQAI VMNVQRQPGA
NIISTADSIR QMLPQLTESL PKSVKVTVLS DRTTNIRASV DDTQFELMMA IALVVMIIYL
FLRNIPATII PGVAVPLSLI GTFAVMVFLD FSINNLTLMA LTIATGFVVD DAIVVIENIS
RYIEKGEKPL AAALKGAGEI GFTIISLTFS LIAVLIPLLF MGDIVGRLFR EFAITLAVAI
LISAVVSLTL TPMMCARMLS QESLRKQNRF SRASEKMFDR IIAAYGRGLA KVLNHPWLTL
SVALSTLLLS VLLWVFIPKG FFPVQDNGII QGTLQAPQSS SFANMAQRQR QVADVILQDP
AVQSLTSFVG VDGTNPSLNS ARLQINLKPL DERDDRVQKV IARLQTAVDK VPGVDLFLQP
TQDLTIDTQV SRTQYQFTLQ ATSLDALSTW VPQLMEKLQQ LPQLSDVSSD WQDKGLVAYV
NVDRDSASRL GISMADVDNA LYNAFGQRLI STIYTQANQY RVVLEHNTEN TPGLAALDTI
RLTSSDGGVV PLSSIAKIEQ RFAPLSINHL DQFPVTTISF NVPDNYSLGD AVQAIMDTEK
TLNLPVDITT QFQGSTLAFQ SALGSTVWLI VAAVVAMYIV LGILYESFIH PITILSTLPT
AGVGALLALM IAGSELDVIA IIGIILLIGI VKKNAIMMID FALAAEREQG MSPRDAIYQA
CLLRFRPILM TTLAALLGAL PLMLSTGVGA ELRRPLGIGM VGGLIVSQVL TLFTTPVIYL
LFDRLALWTK SRFARHEEEA
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