Gene EcE24377A_2366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_2366 
SymbolmdtA 
ID5587477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp2336652 
End bp2337899 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content55% 
IMG OID640926031 
Productmultidrug efflux system subunit MdtA 
Protein accessionYP_001463426 
Protein GI157159391 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGCA GTTATAAATC CCGTTGGGTA ATCGTAATCG TGGTGGTTAT CGCCGCCATC 
GCCGCATTCT GGTTCTGGCA AGGCCGCAAT GACTCCCAGA GTGCAGCCCC AGGGGCGACG
AAACAAGCGC AGCAATCGCC AGCGGGTGGT CGCCGTGGTA TGCGTTCCGG CCCATTAGCC
CCGGTTCAGG CGGCGACCGC CGTAGAACAG GCAGTTCCGC GTTACCTCAC CGGGCTTGGC
ACCATTACCG CCGCTAATAC TGTTACGGTG CGCAGCCGCG TGGACGGTCA ACTGATGGCG
TTACATTTCC AGGAAGGCCA GCAGGTCAAA GCAGGCGATT TACTGGCAGA AATTGACCCC
AGCCAGTTCA AAGTTGCATT AGCACAAGCC CAGGGCCAAC TGGCAAAAGA TAAAGCCACG
CTTGCTAACG CCCGCCGTGA TCTGGCGCGT TATCAGCAAC TGGCAAAAAC CAATCTCGTA
TCCCGTCAGG AGCTGGATGC CCAACAGGCA CTGGTCAGTG AAACCGAAGG CACCATTAAG
GCTGATGAAG CAAGCGTCGC CAGCGCGCAG CTGCAACTCG ACTGGAGCCG CATCACCGCA
CCAGTCGATG GTCGCGTTGG TCTCAAGCAG GTTGATGTTG GTAACCAAAT CTCCAGTGGT
GATACCACCG GAATTGTGGT GATCACCCAG ACGCATCCTA TCGATTTAGT CTTTACCCTG
CCGGAAAGCG ATATCGCTAC CGTCGTGCAG GCGCAAAAAG CCGGGAAACC GCTGGTGGTA
GAAGCCTGGG ATCGCACCAA TTCAAAGAAA TTAAGCGAAG GCACGCTGTT AAGTCTCGAT
AACCAAATCG ATGCCACTAC CGGTACGATT AAAGTGAAAG CACGCTTTAA TAATCAGGAT
GATGCGCTGT TTCCCAATCA GTTTGTTAAC GCGCGCATGT TAGTCGACAC CGAACAAAAC
GCCGTAGTGA TCCCAACAGC CGCCCTGCAA ATGGGCAATG AAGGCCATTT TGTCTGGGTG
CTGAATAGCG AAAACAAGGT CAGCAAACAT CTGGTGACGC CGGGCATTCA GGACAGTCAG
AAAGTGGTGA TCCGTGCAGG TATTTCTGCG GGCGATCGCG TGGTGACAGA CGGCATTGAT
CGCCTGACCG AAGGGGCGAA AGTGGAAGTG GTGGAAGCCC AGAGCACCAC CACTTCGGAA
GAGAAAGCCA CCAGCCGCGA ATACGCGAAA AAAGGAGCAC GCTCCTGA
 
Protein sequence
MKGSYKSRWV IVIVVVIAAI AAFWFWQGRN DSQSAAPGAT KQAQQSPAGG RRGMRSGPLA 
PVQAATAVEQ AVPRYLTGLG TITAANTVTV RSRVDGQLMA LHFQEGQQVK AGDLLAEIDP
SQFKVALAQA QGQLAKDKAT LANARRDLAR YQQLAKTNLV SRQELDAQQA LVSETEGTIK
ADEASVASAQ LQLDWSRITA PVDGRVGLKQ VDVGNQISSG DTTGIVVITQ THPIDLVFTL
PESDIATVVQ AQKAGKPLVV EAWDRTNSKK LSEGTLLSLD NQIDATTGTI KVKARFNNQD
DALFPNQFVN ARMLVDTEQN AVVIPTAALQ MGNEGHFVWV LNSENKVSKH LVTPGIQDSQ
KVVIRAGISA GDRVVTDGID RLTEGAKVEV VEAQSTTTSE EKATSREYAK KGARS