| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2325 |
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| Symbol | vipA |
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| ID | 5588346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 2288314 |
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| End bp | 2289588 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640925990 |
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| Product | VI polysaccharide biosynthesis protein VipA/tviB |
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| Protein accession | YP_001463385 |
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| Protein GI | 157155490 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATTG ATAATATAAA AATAGGCATC ATTGGTCTTG GTTATGTTGG CCTGCCTTTG
GCGGTGGAAT TCGGGAAAAA ATATAATACT GTTGGTTTTG ATATTAAACA AAACAGAATT
GACGAATTAA AAAAACAAAT GGATAGTACA CTGGAGTGTA CTGCGGATGA GCTTGCTAGT
GCGAAATTTC TTCACTATTC ATGTGAAATC GAAGCACTCA AAGCGTGTAA TATATTTATT
GTTACTGTAC CTACGCCAAT TGATAAATAT AAACGACCGG ATTTAAGTCC CTTGGTTAGT
GCTTCAAAAA TGTTAAGCAA GGTTATTAAA AATGGCGATA TCATTATATT TGAATCGACG
GTCTACCCAG GCGCAACAGA AGAAATATGT GTTCCTCAGA TTGAAGCTGG TTCCGGATTA
GTTTTCAACA AAGATTTTTT TATAGGCTAT AGCCCAGAGA GAATCAATCC AGGAGATAAA
AATCATAGAG TAACAAATAT TATGAAAGTA ACTTCTGGTT CAACACCAGA AGCAGCAACG
TTTGTGGATA AAATTTACTC CTCAATTATA ACAGCCGGGA CATACAAGGC ATCATCTATT
AAGGTGGCTG AGGCCGCTAA GGTAATTGAA AATACGCAAC GAGATCTTAA TATTGCACTA
ATAAACGAAT TGGCTATCAT CTTCAATAAA TTAGGTATTG ATACTGAGGA TGTTTTAAAG
GCAGCGGGTA CTAAATGGAA TTTTCTCCCT TTTCGTCCCG GCCTGGTTGG TGGTCATTGT
ATCGGGGTTG ACCCATATTA TTTAACGCAT AAAGCTCAAG AAATTGGTTA TCATCCAGAG
GTTATTTTGG CTGGTAGACG TATTAATGAT GATATGGCAC GTTATGTTGC ATCTCAACTT
ATAAAGGAAA TGATTAAGGC AGGTATTCTA ATAGATAATG CTAATATTTT AATTATGGGG
TTATCTTTTA AAGAAAATTG CCCTGATATT CGCAATACGA AAATTATTGA TATAATATCA
GAATTAAAAG ATTATAATTT GAATGTCGAT GTTTATGACC CTTGGGTAAG TGAAGATGAG
GCATTGCAGG AATATGGCAT AGAAATTCAT TCTACTAAAC CTTCTAAGAA ATATGAAGGC
ATAATTTTTG CTGTAGCCCA TGAGCAATTC AAAAATATGC AATCCATTGA AATCAAGGAG
CTGCAGTCCA CAAAATGTGT GACATATGAT TTGAAATATA TTCTTAATAA ATCAGATGCA
ACAATTAGAC TTTAA
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| Protein sequence | MNIDNIKIGI IGLGYVGLPL AVEFGKKYNT VGFDIKQNRI DELKKQMDST LECTADELAS
AKFLHYSCEI EALKACNIFI VTVPTPIDKY KRPDLSPLVS ASKMLSKVIK NGDIIIFEST
VYPGATEEIC VPQIEAGSGL VFNKDFFIGY SPERINPGDK NHRVTNIMKV TSGSTPEAAT
FVDKIYSSII TAGTYKASSI KVAEAAKVIE NTQRDLNIAL INELAIIFNK LGIDTEDVLK
AAGTKWNFLP FRPGLVGGHC IGVDPYYLTH KAQEIGYHPE VILAGRRIND DMARYVASQL
IKEMIKAGIL IDNANILIMG LSFKENCPDI RNTKIIDIIS ELKDYNLNVD VYDPWVSEDE
ALQEYGIEIH STKPSKKYEG IIFAVAHEQF KNMQSIEIKE LQSTKCVTYD LKYILNKSDA
TIRL
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