| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2324 |
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| Symbol | vipB |
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| ID | 5588814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 2287268 |
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| End bp | 2288299 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640925989 |
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| Product | VI polysaccharide biosynthesis protein vipB/tviC |
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| Protein accession | YP_001463384 |
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| Protein GI | 157155425 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAGAT ATGAAAAAAC TATTGAGCAA TTAAAAGTTA AACCTAAGAC TTGGTTGATA
ACAGGAGTTG CTGGCTTCAT TGGCTCAAAT TTACTTGAAA CACTTTTAAG ATTAAATCAG
ACAGTAGTTG GTTTGGATAA TTTTGCTACA GGACATCAGC GAAATCTTGA TGAAGTCCAG
CAAAACGTTA CACCTGAAGC ATGGCAAAAA TTTACAATGA TCGAAGGTGA TATACGTGAT
TATGAGACAT GTATGAAGGC CGTTGATAAT GTTAACTACG TATTGCACCA GGCTGCACTT
GGTTCAGTGC CTCGTTCAAT TAATGATCCT ATAACAACTA ATGAAGTTAA TGTCTCTGGC
TTCTTGAATA TGTTACAAGC TGCCAAGTGT AGAGATGTAG AGAGTTTTGT TTTTGCCGCT
TCAAGTTCAA CATATGGTGA TCATACCGCT CTGCCCAAAA TAGAACATAC AATTGGTAAA
CCATTATCTC CCTATGCTAT CACAAAATAT GTAAATGAAT TATATGCGGA AGTTTTCGCA
AAAATGTATG GTTTTAAAAG CATTGGTTTG AGATATTTCA ATGTCTTTGG TAAAAGGCAA
GATCCAAATG GTGCATATGC AGCAGTAATA CCCAAATGGA TATCGGCAAT GCTCATGGAT
AAAGATATTT ATATCAATGG TGATGGGGAA ACTAGTAGAG ATTTTTCATT TATTGAAAAT
ACTGTTCAAA TGAATATTCT TGCTGCTACA GCAGATGATA GTGCAAAAGG AGAAGTTTAC
AACGTTGCTT ATGGTGAGAG AACATCATTA AACGAATTAG TTGAATTTAT AAAAAATGAC
CTTGGCAGTA ATGGAATAAA ATATGCAGGG AATATTATAT ATCGGGATTT CAGAAAAGGT
GATGTGAGAC ATTCTCTAGC TGATATTAGT AAAGCTAGAG AAATGCTCGG CTATCAACCT
CAGTTTGATA TTAAAACTGG TTTAAGACAG GCAATGCCCT GGTATATAAA CTTATTTAAA
AAAGCAGAAT GA
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| Protein sequence | MTRYEKTIEQ LKVKPKTWLI TGVAGFIGSN LLETLLRLNQ TVVGLDNFAT GHQRNLDEVQ
QNVTPEAWQK FTMIEGDIRD YETCMKAVDN VNYVLHQAAL GSVPRSINDP ITTNEVNVSG
FLNMLQAAKC RDVESFVFAA SSSTYGDHTA LPKIEHTIGK PLSPYAITKY VNELYAEVFA
KMYGFKSIGL RYFNVFGKRQ DPNGAYAAVI PKWISAMLMD KDIYINGDGE TSRDFSFIEN
TVQMNILAAT ADDSAKGEVY NVAYGERTSL NELVEFIKND LGSNGIKYAG NIIYRDFRKG
DVRHSLADIS KAREMLGYQP QFDIKTGLRQ AMPWYINLFK KAE
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