| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2278 |
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| Symbol | pduF |
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| ID | 5590844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 2245761 |
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| End bp | 2246570 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640925944 |
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| Product | propanediol diffusion facilitator |
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| Protein accession | YP_001463339 |
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| Protein GI | 157155813 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0682066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGATT CACTCAAGGC GCAATGCGTT GCCGAGTTTT TAGGCACCGG ACTGTTCCTC
TTTTTTGGCA TTGGTTGTTT GTGCGCCCTG AAACTTGCTG GGGCAAGTCT GGGACTGTGG
GAAATTTGTA TCATTTGGGG GTTAGGGATT TCGCTTGCTG TTTACCTTAC GGCAGGTATT
TCCGGCGCTC ATCTCAACCC GGCTGTTACC ATTGCTCTGT GGCTGTTTGC CTCTTTCCCA
GCCCGTAAAG TGCTGCCATT TTGTGTGGCG CAATTAGCGG GTGCCTTTGG TGGTGCGGTT
CTGGCATATT CTCTATACAG TAGTCTGTTT ACCGATTTTG AATCTGCTCA CAATATGGTG
CGTGGTAGCG CAGAAAGTTT ACAACTCGTC AGTATCTTCA GTACTTATCC GGCAGCGGCG
ATTAATGTAT GGCAAGCTGC GTTGGTCGAA GTGGTCATAA CGTCCATGTT AATGGGGGTG
ATTATGGCGT TGACCGATGA CGGTAATGGC GTACCCAAAG GACCGCTTGC ACCTTTACTT
ATTGGTATTC TGGTTGCTGT TATTGGTGCT TCTACCGGAC CATTAACCGG TTTTGCCATG
AATCCAGCGC GTGATTTTGG ACCTAAGATT TTCACCTGGC TTGCGGGGTG GGGAGAAATT
GCGATGACTG GTGGACGCAA TATTCCTTAT TTCATTGTAC CCATTATTGC ACCGATCATT
GGGGCATGTG TTGGTGCGGC GATTTATCGC TATCTCATTG CAAAGAATTT ACCTGTCAAT
AGTGTTACAC CTAAAGGAAT TAGCGAATAA
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| Protein sequence | MNDSLKAQCV AEFLGTGLFL FFGIGCLCAL KLAGASLGLW EICIIWGLGI SLAVYLTAGI
SGAHLNPAVT IALWLFASFP ARKVLPFCVA QLAGAFGGAV LAYSLYSSLF TDFESAHNMV
RGSAESLQLV SIFSTYPAAA INVWQAALVE VVITSMLMGV IMALTDDGNG VPKGPLAPLL
IGILVAVIGA STGPLTGFAM NPARDFGPKI FTWLAGWGEI AMTGGRNIPY FIVPIIAPII
GACVGAAIYR YLIAKNLPVN SVTPKGISE
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