Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_2273 |
Symbol | cobT |
ID | 5589336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 2241215 |
End bp | 2242294 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640925939 |
Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
Protein accession | YP_001463334 |
Protein GI | 157157289 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000166613 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACAC TTGCCGATTT ACTGAATACG ATCCCTGCCA TCGATCCTGC CGCGATGTCG CGTGCACAAC GGCATATTGA CGGGTTACTC AAACCTGTTG GTAGCCTGGG AAGGCTGGAG GCGCTTGCCA TACAACTGGC AGGAATGCCG GGGTTGAATG GCATACCGCA TGTGGGCAAA AAAGCGGTAC TGGTTATGTG TGCCGATCAC GGCGTCTGGG AGGAAGGGGT CGCTATTTCC CCAAAAGAAG TGACAGCCAT TCAGGCTGAA AATATGACCC GCGGAACAAC CGGCGTGTGT GTGCTGGCAG CACAAGCGGG CGCTAACGTC TACGTAATTG ATGTTGGTAT TGATACTGCT GAGCCTATCC CCGGGCTTAT CAACATGCGT GTTGCTCGAG GTAGTGGCAA TATTGCTTCA GCTCCGGCAA TGAGTCGCCA TCAGGCAGAA AAGTTGCTTT TGGACGTCAT ATGTTATACG CGGGAGCTGG CAAAAAACGG TGTTACGCTG TTTGGTGTAG GTGAACTGGG GATGGCAAAC ACGACACCGG CAGCGGCAAT AGTCAGCACA ATCACTGGCC GGGCTCCTGA AGAAGTGGTT GGGATTGGCG CAAACCTGCC GACAGATAAA CTGGCTAATA AAATTGATGT TGTGCGCCGG GCGATTACGT TGAATCAACC AAATCCGCAG GATGGCGTTG ATGTCCTGGC AAAAGTGGGT GGATTTGATT TGGTCGGAAT GGCTGGCGTG ATGTTAGGCG CTGCTTCCTG CGGTTTACCC GTGTTGCTGG ATGGATTTCT TTCTTATGCT GCCGCGCTCG CAGCCTGCCA GATGTCTCCT GCAATCAAAC CGTATCTCAT TCCTTCTCAC CTGTCGGCAG AAAAAGGGGC GCGTATTGCG CTGTCGCATT TGGGGCTGGA GCCTTATCTC AATATGGAGA TGCGTTTAGG TGAGGGGAGT GGCGCAGCTC TGGCGATGCC CATCATCGAA GCTGCCTGTG CGATATATAA CAACATGGGC GAACTTGCTG CCAGTAATAT TGTTCTACCG GGGAATACGA CTTCTGATTT GAACAGTTAA
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Protein sequence | MQTLADLLNT IPAIDPAAMS RAQRHIDGLL KPVGSLGRLE ALAIQLAGMP GLNGIPHVGK KAVLVMCADH GVWEEGVAIS PKEVTAIQAE NMTRGTTGVC VLAAQAGANV YVIDVGIDTA EPIPGLINMR VARGSGNIAS APAMSRHQAE KLLLDVICYT RELAKNGVTL FGVGELGMAN TTPAAAIVST ITGRAPEEVV GIGANLPTDK LANKIDVVRR AITLNQPNPQ DGVDVLAKVG GFDLVGMAGV MLGAASCGLP VLLDGFLSYA AALAACQMSP AIKPYLIPSH LSAEKGARIA LSHLGLEPYL NMEMRLGEGS GAALAMPIIE AACAIYNNMG ELAASNIVLP GNTTSDLNS
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