| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2187 |
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| Symbol | |
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| ID | 5586255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 2155907 |
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| End bp | 2157583 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640925857 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001463257 |
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| Protein GI | 157155861 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000194525 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACC AGAGCTGGTT GAAAAAACTC GCACGCCGCC TGGGGCCTGG TCATGTCGTT
AATCTCTGCT TTATCGTGGT ATTGCTTTTT TCCACCTTGC TCACCTGGCG TGAAGTAGTG
GTGCTGGAAG ATGCCTATAT CTCCAGCCAG CGTAATCATC TGGAAAACGT AGCCAACGCG
CTCGATAAGC ATTTGCAGTA TAACGTCGAC AAACTGATCT TTTTGCGTAA TGGCATGCGC
GAAGCTCTCG TAGCGCCACT GGATTTCACT TCACTGCGTA ATGCTGTAAC CGAGTTCGAA
CAGCATCGCG ACGAGCACGC CTGGCAAATT GAACTCAACC GACGGCGCAC TCTGCCAGTT
AATGGTGTGT CGGATGCATT AGTCAGCGAG GGGAATCTCC TGTCTCGCGA AAATGAAAGC
CTCGACAATG AAATTACCGC TGCACTGGAA GTTGGTTACT TGCTGCGACT GGCGCACAAC
TCCTCGTCGA TGGTTGAACA GGCGATGTAT GTCTCGCGTG CCGGATTTTA CGTTTCGACG
CAGCCGACCT TGTTTACGCG CAATGTTCCA ACGCGTTATT ACGGCTATGT CACCCAACCC
TGGTTTATCG GCCATTCGCA ACGAGAAAAT CGTCACCGCG CGGTACGCTG GTTTACTTCG
CAACCGGAAC ACGCCAGCAA TACTGAACCG CAGGTTACCG TCAGTGTTCC GGTAGACAGT
AATAACTACT GGTATGGCGT GCTGGGGATG AGTATTCCTG TGCGTACTAT GCAGCAATTT
TTAAGAAACG CCATCGATAA AAACCTCGAT GGTGAGTATC AGCTCTATGA CAGTAAGCTG
AGATTTTTGA CCTCTTCCAA TCCTGACCAT CCAACAGGGA ATATTTTTGA TCCTCGTGAA
CTGGCCTTGC TGGCGCAGGC GATGGAACAT GACACGCGGG GCGGCATTCG TATGGACAGT
CGCTATGTTA GCTGGGAACG TCTGGACCAT TTCGACGGTG TGCTGGTGCG CGTCCATACG
CTAAGCGAAG GCGTGCGCGG CGATTTCGGT AGTATCAGCA TTGCATTAAC CCTGCTGTGG
GCGCTCTTTA CCACCATGTT ACTCATCTCC TGGTATGTGA TTCGCCGGAT GGTTAGCAAC
ATGTATGTTC TGCAAAGCTC GTTGCAGTGG CAGGCGTGGC ACGACACCTT AACCCGTTTA
TATAATAGTG GCGCACTGTT TGAAAAAGCC CGTCCGCTCG CGAAATTGTG TCAGACGCAC
CAACATCCTT TTTCTGTCAT TCAGGTCGAT CTTGACCATT TTAAAGCGAT TAATGACCGC
TTTGGTCATC AGGCGGGCGA CCGTGTTCTT TCTCATGCTG CCGGATTAAT TAGCAGTTCC
TTGCGTGCGC AGGACGTTGC CGGGCGGGTC GGTGGTGAGG AGTTTTGTGT GATTCTGCCA
GGCGCGAGTC TGACGGAGGC TGCGGAAGTC GCAGAACGTA TTCGCCTGAA GTTAAATGAA
AAAGAGATGC TGATTGCTAA GAGTACGACG ATACGCATCA GTGCCTCGTT GGGGGTTAGT
AGCAGCGAGG AAACCGGTGA TTATGATTTT GAACAACTCC AGTCACTGGC TGACCGTCGG
CTTTATCTCG CTAAACAGGC CGGGCGTAAT CTGGTATGCG CGAGCGATAA CGCTTAA
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| Protein sequence | MENQSWLKKL ARRLGPGHVV NLCFIVVLLF STLLTWREVV VLEDAYISSQ RNHLENVANA
LDKHLQYNVD KLIFLRNGMR EALVAPLDFT SLRNAVTEFE QHRDEHAWQI ELNRRRTLPV
NGVSDALVSE GNLLSRENES LDNEITAALE VGYLLRLAHN SSSMVEQAMY VSRAGFYVST
QPTLFTRNVP TRYYGYVTQP WFIGHSQREN RHRAVRWFTS QPEHASNTEP QVTVSVPVDS
NNYWYGVLGM SIPVRTMQQF LRNAIDKNLD GEYQLYDSKL RFLTSSNPDH PTGNIFDPRE
LALLAQAMEH DTRGGIRMDS RYVSWERLDH FDGVLVRVHT LSEGVRGDFG SISIALTLLW
ALFTTMLLIS WYVIRRMVSN MYVLQSSLQW QAWHDTLTRL YNSGALFEKA RPLAKLCQTH
QHPFSVIQVD LDHFKAINDR FGHQAGDRVL SHAAGLISSS LRAQDVAGRV GGEEFCVILP
GASLTEAAEV AERIRLKLNE KEMLIAKSTT IRISASLGVS SSEETGDYDF EQLQSLADRR
LYLAKQAGRN LVCASDNA
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