| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2184 |
|---|
| Symbol | rcsA |
|---|
| ID | 5590058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 2153552 |
|---|
| End bp | 2154175 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640925853 |
|---|
| Product | colanic acid capsular biosynthesis activation protein A |
|---|
| Protein accession | YP_001463253 |
|---|
| Protein GI | 157157311 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000000916169 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACGA TTATTATGGA TTTATGTAGT TACACCCGAC TAGGTTTAAC CGGGTATCTG
TTGAGTAGAG GGGTTAAAAA AAGAGAAATC AACGACATTG AAACCGTTGA TGACCTTGCC
ATAGCTTGTG ATTCACAGCG CCCTTCAGTG GTGTTTATTA ATGAGGACTG TTTCATCCAT
GATGCTTCTA ACAGTCAGCA CATCAAGCAC ATCATTAATC AACATCCCAA TACGTTATTT
ATCGTTTTTA TGGCAATTGC CAATGTTCAT TTTGATGAAT ATCTATTGGT CAGAAAAAAT
TTATTGATAA GTTCTAAATC GATTAAACCG GAATCTCTCG ACGATATCCT TGGCGATATT
CTGAAAAAAG AGACAACGAT AACCTCGTTT TTAAATATGC CGACGTTATC ATTGAGCCGA
ACCGAATCGA GTATGTTGCG AATGTGGATG GCAGGTCAGG GAACCATTCA AATCTCTGAC
CAAATGAATA TCAAAGCCAA GACCGTTTCA TCGCATAAAG GTAATATTAA ACGTAAGATC
AAAACGCATA ATAAACAGGT TATCTACCAT GTCGTCCGAC TGACGGATAA TGTGACTAAT
GGTATTTTTG TCAACATGCG CTAA
|
|---|
| Protein sequence | MSTIIMDLCS YTRLGLTGYL LSRGVKKREI NDIETVDDLA IACDSQRPSV VFINEDCFIH
DASNSQHIKH IINQHPNTLF IVFMAIANVH FDEYLLVRKN LLISSKSIKP ESLDDILGDI
LKKETTITSF LNMPTLSLSR TESSMLRMWM AGQGTIQISD QMNIKAKTVS SHKGNIKRKI
KTHNKQVIYH VVRLTDNVTN GIFVNMR
|
|---|
| |