Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_2132 |
Symbol | araF |
ID | 5585995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 2111960 |
End bp | 2112949 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640925802 |
Product | L-arabinose ABC transporter, periplasmic L-arabinose-binding protein |
Protein accession | YP_001463205 |
Protein GI | 157159136 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00117464 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAAAT TTACTAAAGC CCTGGCAGCC ATTGGTCTGG CAGCCGTTAT GTCACAATCC GCTATGGCGG AGAACCTGAA GCTCGGTTTC CTGGTGAAGC AACCGGAAGA GCCGTGGTTC CAGACCGAAT GGAAGTTTGC CGATAAAGCC GGGAAGGATT TAGGGTTTGA GGTTATTAAG ATTGCCGTGC CGGATGGCGA AAAAACATTG AACGCGATCG ACAGCCTGGC TGCCAGTGGC GCAAAAGGTT TCGTTATTTG TACTCCGGAC CCCAAACTCG GCTCTGCCAT CGTCGCGAAA GCGCGTGGCT ACGATATGAA AGTCATTGCC GTGGATGACC AGTTTGTTAA CGCCAAAGGT AAGCCAATGG ATACCGTTCC GCTGGTGATG ATGGCGGCGA CTAAAATTGG CGAACGTCAG GGTCAGGAAC TGTATAAAGA GATGCAGAAA CGTGGCTGGG ATGTCAAAGA AAGCGCGGTG ATGGCGATTA CCGCCAACGA ACTGGATACG GCACGTCGCC GTACAACGGG TTCTATGGAT GCGCTGAAAG CGGCCGGATT CCCGGAAAAA CAAATTTATC AGGTACCTAC CAAATCTAAC GACATCCCGG GGGCATTTGA CGCTGCCAAC TCAATGCTGG TTCAACATCC GGAAGTTAAA CATTGGCTGA TCGTCGGTAT GAACGACAGC ACCGTGCTGG GCGGCGTACG CGCGACGGAA GGTCAGGGCT TTAAAGCTGC CGATATCATC GGCATTGGCA TTAACGGTGT GGATGCGGTG AGCGAACTGT CTAAAGCACA GGCAACCGGC TTCTACGGTT CCCTGCTGCC AAGCCCGGAC GTACATGGCT ATAAATCCAG CGAAATGCTT TACAACTGGG TAGCAAAAGA CGTTGAACCG CCAAAATTTA CCGAAGTTAC CGACGTGGTG CTGATCACGC GTGACAACTT TAAAGAAGAA CTGGAGAAAA AAGGTTTAGG CGGTAAGTAA
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Protein sequence | MHKFTKALAA IGLAAVMSQS AMAENLKLGF LVKQPEEPWF QTEWKFADKA GKDLGFEVIK IAVPDGEKTL NAIDSLAASG AKGFVICTPD PKLGSAIVAK ARGYDMKVIA VDDQFVNAKG KPMDTVPLVM MAATKIGERQ GQELYKEMQK RGWDVKESAV MAITANELDT ARRRTTGSMD ALKAAGFPEK QIYQVPTKSN DIPGAFDAAN SMLVQHPEVK HWLIVGMNDS TVLGGVRATE GQGFKAADII GIGINGVDAV SELSKAQATG FYGSLLPSPD VHGYKSSEML YNWVAKDVEP PKFTEVTDVV LITRDNFKEE LEKKGLGGK
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