Gene EcE24377A_2081 details

Gene Information

• Locus tag: EcE24377A_2081
• Symbol: edd
• ID: 5588546
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: -
• Start bp: 2060390
• End bp: 2062201
• Gene Length: 1812 bp
• Protein Length: 603 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640925751
• Product: phosphogluconate dehydratase
• Protein accession: YP_001463154
• Protein GI: 157157338
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR01196] 6-phosphogluconate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCCAC AATTGTTACG CGTAACAAAT CGAATCATTG AACGTTCGCG CGAGACTCGC 
TCTGCTTATC TCGCCCGGAT AGAACAAGCG AAAACTTCGA CCGTTCATCG TTCGCAGTTG 
GCATGCGGTA ACCTGGCACA CGGTTTCGCT GCCTGCCAGC CAGAAGACAA AGCCTCTTTG 
AAAAGCATGT TGCGTAACAA TATCGCCATC ATCACCTCCT ATAACGACAT GCTCTCCGCG 
CACCAGCCTT ATGAACACTA TCCAGAAATC ATTCGTAAAG CCCTGCATGA AGCGAATGCG 
GTTGGTCAGG TTGCGGGCGG TGTTCCGGCG ATGTGTGATG GTGTCACCCA GGGGCAGGAT 
GGAATGGAAT TGTCGCTGCT AAGCCGCGAA GTGATAGCGA TGTCTGCGGC GGTCGGGCTG 
TCCCATAACA TGTTTGATGG TGCTCTGTTC CTCGGTGTGT GCGACAAGAT TGTCCCGGGT 
CTGACGATGG CAGCCCTGTC GTTTGGTCAT TTGCCTGCGG TGTTTGTGCC GTCTGGACCG 
ATGGCAAGCG GTTTGCCAAA TAAAGAAAAA GTGCGTATTC GCCAGCTTTA TGCCGAAGGT 
AAAGTGGACC GCATGGCCTT ACTGGAGTCA GAAGCCGCGT CTTACCATGC GCCGGGAACA 
TGTACTTTCT ACGGTACTGC CAACACCAAC CAGATGGTGG TGGAATTTAT GGGGATGCAG 
TTGCCAGGCT CTTCTTTTGT TCATCCGGAT TCTCCGCTGC GCGATGCTTT GACCGCTGCC 
GCTGCGCGTC AGGTTACACG CATGACCGGT AATGGTAATG AATGGATGCC GATCGGTAAG 
ATGATCGATG AGAAAGTGGT GGTGAACGGT ATCGTTGCAC TGCTGGCGAC CGGTGGTTCC 
ACTAACCACA CCATGCACCT GGTGGCGATG GCGCGCGCGG CCGGTATTCA GATTAACTGG 
GATGACTTCT CTGACCTTTC TGATGTTGTA CCGCTGATGG CACGTCTCTA CCCGAACGGT 
CCGGCCGATA TTAACCACTT CCAGGCGGCA GGTGGCGTAC CGGTTCTGGT GCGTGAACTG 
CTCAAAGCAG GCCTGCTGCA TGAAGATGTC AATACGGTGG CAGGCTTTGG TCTGTCTCGT 
TATACCCTTG AACCATGGCT GAATAATGGT GAACTGGACT GGCGGGAAGG GGCGGAAAAA 
TCACTCGACA GCAATGTGAT CGCTTCCTTC GAACAACCTT TCTCTCATCA TGGTGGGACA 
AAAGTGTTAA GCGGTAACCT GGGCCGTGCG GTTATGAAAA CCTCTGCCGT GCCGGTTGAG 
AACCAGGTGA TTGAAGCGCC AGCGGTTGTT TTTGAAAGCC AGCATGACGT TATGCCGGCC 
TTTGAAGCGG GTTTGCTGGA CCGCGATTGT GTCGTTGTTG TCCGTCATCA GGGGCCAAAA 
GCGAACGGAA TGCCAGAATT ACATAAACTC ATGCCGCCAC TTGGTGTATT ATTGGACCGG 
TGTTTCAAAA TTGCGTTAGT TACCGATGGA CGACTCTCCG GCGCTTCAGG TAAAGTGCCG 
TCAGCTATCC ACGTAACACC AGAAGCCTAC GATGGCGGGC TGCTGGCAAA AGTGCGCGAC 
GGGGACATCA TTCGTGTGAA TGGACAGACA GGCGAACTGA CGCTGCTGGT AGACGAAGCG 
GAACTGGCTG CTCGCGAACC GCACATTCCT GACCTGAGCG CGTCACGCGT GGGGACAGGA 
CGTGAATTAT TCAGCGCCTT GCGTGAAAAA CTGTCCGGTG CCGAACAGGG CGCAACCTGT 
ATCACTTTTT AA 

 

Protein sequence

MNPQLLRVTN RIIERSRETR SAYLARIEQA KTSTVHRSQL ACGNLAHGFA ACQPEDKASL 
KSMLRNNIAI ITSYNDMLSA HQPYEHYPEI IRKALHEANA VGQVAGGVPA MCDGVTQGQD 
GMELSLLSRE VIAMSAAVGL SHNMFDGALF LGVCDKIVPG LTMAALSFGH LPAVFVPSGP 
MASGLPNKEK VRIRQLYAEG KVDRMALLES EAASYHAPGT CTFYGTANTN QMVVEFMGMQ 
LPGSSFVHPD SPLRDALTAA AARQVTRMTG NGNEWMPIGK MIDEKVVVNG IVALLATGGS 
TNHTMHLVAM ARAAGIQINW DDFSDLSDVV PLMARLYPNG PADINHFQAA GGVPVLVREL 
LKAGLLHEDV NTVAGFGLSR YTLEPWLNNG ELDWREGAEK SLDSNVIASF EQPFSHHGGT 
KVLSGNLGRA VMKTSAVPVE NQVIEAPAVV FESQHDVMPA FEAGLLDRDC VVVVRHQGPK 
ANGMPELHKL MPPLGVLLDR CFKIALVTDG RLSGASGKVP SAIHVTPEAY DGGLLAKVRD 
GDIIRVNGQT GELTLLVDEA ELAAREPHIP DLSASRVGTG RELFSALREK LSGAEQGATC 
ITF