| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2047 |
|---|
| Symbol | manZ |
|---|
| ID | 5588601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 2031492 |
|---|
| End bp | 2032343 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640925717 |
|---|
| Product | PTS system mannose-specific transporter subunit IID |
|---|
| Protein accession | YP_001463120 |
|---|
| Protein GI | 157158926 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
|---|
| TIGRFAM ID | [TIGR00828] PTS system, mannose/fructose/sorbose family, IID component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000021025 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGATA CAACTCAAAC TACCACCGAG AAAAAACTCA CTCAAAGTGA TATTCGTGGC
GTCTTCCTGC GTTCTAACCT CTTCCAGGGT TCATGGAACT TCGAACGTAT GCAGGCACTG
GGTTTCTGCT TCTCTATGGT ACCGGCAATT CGTCGCCTCT ACCCTGAGAA CAACGAAGCT
CGTAAACAAG CTATTCGCCG TCACCTGGAG TTCTTTAACA CCCAGCCGTT CGTGGCTGCG
CCGATTCTCG GCGTAACCCT GGCGCTGGAA GAACAGCGTG CTAATGGCGC AGAGATCGAC
GACGGTGCTA TCAACGGTAT CAAAGTCGGT TTGATGGGGC CGCTGGCTGG TGTAGGCGAC
CCGATCTTCT GGGGAACCGT ACGTCCGGTA TTTGCAGCAC TGGGTGCCGG TATCGCGATG
AGCGGCAGCC TGTTAGGTCC GCTGCTGTTC TTCATCCTGT TTAACCTGGT GCGTCTGGCA
ACCCGTTACT ACGGCGTAGC GTATGGTTAC TCCAAAGGTA TCGATATCGT TAAAGATATG
GGTGGTGGCT TCCTGCAAAA ACTGACGGAA GGGGCGTCTA TCCTCGGCCT GTTTGTCATG
GGGGCATTGG TTAACAAGTG GACACATGTC AACATCCCGC TGGTTGTCTC TCGCATTACT
GACCAGACGG GCAAAGAACA CGTTACTACT GTCCAGACTA TTCTGGACCA GTTAATGCCA
GGCCTGGTAC CACTGCTGCT GACCTTTGCT TGTATGTGGC TACTGCGCAA AAAAGTTAAC
CCGCTGTGGA TCATCGTTGG CTTCTTCGTC ATCGGTATCG CTGGTTACGC TTGCGGCCTG
CTGGGACTGT AA
|
|---|
| Protein sequence | MVDTTQTTTE KKLTQSDIRG VFLRSNLFQG SWNFERMQAL GFCFSMVPAI RRLYPENNEA
RKQAIRRHLE FFNTQPFVAA PILGVTLALE EQRANGAEID DGAINGIKVG LMGPLAGVGD
PIFWGTVRPV FAALGAGIAM SGSLLGPLLF FILFNLVRLA TRYYGVAYGY SKGIDIVKDM
GGGFLQKLTE GASILGLFVM GALVNKWTHV NIPLVVSRIT DQTGKEHVTT VQTILDQLMP
GLVPLLLTFA CMWLLRKKVN PLWIIVGFFV IGIAGYACGL LGL
|
|---|
| |