| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2023 |
|---|
| Symbol | |
|---|
| ID | 5587940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 2006338 |
|---|
| End bp | 2007285 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640925694 |
|---|
| Product | IS605 family transposase |
|---|
| Protein accession | YP_001463097 |
|---|
| Protein GI | 157158023 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1943] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000000292395 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAG AAACCGATAT CCGGCGTGGA AGGCATTGTG TTTTCCTGAT GCATGTTCAC
CTGGTCTTTG TCACCAGATA CCGACTCCAG ATTTTTGACC ATGACGCGAC AGAAAAACTA
CGCACTTACT TTTCAAATGT ATGTGCTGAT TTTGAAGCTG AACTTGTTGA AATGGATGGC
GAACCAGATC ACGTCCATTT GTTAATTAAC TATCCTCCCA AACTGGCGAT ATCCAGTCTG
GTAAACAGCC TCAAAGGCGT ATCGGGTAGG TTACTGCGAC GAGATCGACC AGATATTGCA
GTCAGGTATT ACTACAAAGG CGTTTTGTGG AGTCCTGGCT ATTTTGCCAG TAGCTGCGGA
GGTGCGCCAA TATCCGTCAT CCGCCAATAC ATTGAACAAC AGCAAACACC TGGTCAGGTG
GAAAACCGCG CCTTATATCC CCGCCCTGAA GGACGGGGTT TTACGGCGCA CCGGATAAGA
ACGCACGGTA TTCACCAGAT CTTTTATCAC TTCAGCCGCC ACTTCTGGCA CCAGCAAAGT
CATCGGCGTC TCTGTTTCAT AATCGACAGA AACGCCATTG CTGTTATTGG TGACGGTCAC
GGTATACGTT GCTTTGCCCA TGATTCATTT CCCGTTATGA ATGACTTTCC GTTGTTGCGC
ACCTTCCATC AGGACTTCAG GAGCCACGAA GAAGTCAATG TTGAAATAAG TATCGTCAGT
CATGGCTTCA ATGTTGTGCC ACTTTTCTGG AGGGAACACC GCAAACTGCC CCGCTTCGAT
AAGGATCACC TGATCAGGCT CTGCACTGTG TTCATCAGCG TAGCCGAGAT ATTTGACCGC
CCCATGCATA ACGGAAAGGC GTGGGTAAAC CCCCGGGCGC GTTCCTTTAT CAAGATGACG
TTCGAATATT CCGGCAGGCG CAGTTTGTTT ATTCCAGAAA GGCGTTGA
|
|---|
| Protein sequence | MKKETDIRRG RHCVFLMHVH LVFVTRYRLQ IFDHDATEKL RTYFSNVCAD FEAELVEMDG
EPDHVHLLIN YPPKLAISSL VNSLKGVSGR LLRRDRPDIA VRYYYKGVLW SPGYFASSCG
GAPISVIRQY IEQQQTPGQV ENRALYPRPE GRGFTAHRIR THGIHQIFYH FSRHFWHQQS
HRRLCFIIDR NAIAVIGDGH GIRCFAHDSF PVMNDFPLLR TFHQDFRSHE EVNVEISIVS
HGFNVVPLFW REHRKLPRFD KDHLIRLCTV FISVAEIFDR PMHNGKAWVN PRARSFIKMT
FEYSGRRSLF IPERR
|
|---|
| |