Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1993 |
Symbol | ydjE |
ID | 5588309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 1978243 |
End bp | 1979601 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640925665 |
Product | major facilitator family transporter |
Protein accession | YP_001463068 |
Protein GI | 157155243 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.863885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACAAT ATGATCAAAT TGGCGCAAGA CTGGACCGCT TGCCTTTGGC CCGGTTTCAT TATCGTATAT TTGGTATTAT AAGCTTTAGT CTGTTATTAA CAGGGTTTTT GAGTTACTCC GGTAATGTCG TCTTAGCAAA GCTGGTAAGC AATGGATGGT CAAATAATTT CCTCAATGCC GCCTTTACCT CGGCATTAAT GTTTGGTTAT TTCATCGGCT CACTTACTGG TGGGTTTATT GGTGACTACT TTGGGCGGCG CAGGGCGTTT CGCATAAATC TTCTCATCGT CGGTATTGCT GCAACAGGGG CCGCTTTTGT CCCTGATATG TACTGGCTCA TCTTCTTTCG CTTCCTGATG GGAACAGGAA TGGGGGCGCT GATTATGGTT GGCTATGCCT CATTTACGGA GTTTATCCCC GCGACGGTGC GTGGAAAATG GTCCGCGCGG CTCTCATTTG TTGGTAACTG GTCGCCCATG CTGTCTGCGG CGATAGGCGT GGTGGTTATC GCTTTTTTTA GTTGGCGAAT AATGTTTCTG CTGGGTGGTA TTGGCATACT GTTAGCCTGG TTTCTCTCAG GTAAATGCTT TATCGAGTCG CCACGATGGC TGGCAGGGAA AGGGCAAATC GCCGGTGCAG AAAGCCAACT TCGTGAAGTA GAGCAGCAAA TTGAAAGAGA GAAGAGTATT CGTTTACCCC CGCTTACTTC GTATCAGAGC AACAGCAAGG TTAAAGTAAT CAAGGGTACT TTCTGGCTCC TGTTTAAAGG TGAAATGTTA CGACGTACAT TAGTCGCGAT TACTGTTTTA ATTGCAATGA ACATCTCGCT TTATACCATC ACCGTATGGA TACCGACCAT ATTTGTTAAC TCCGGCATTG ATGTCGATAA ATCAATATTA ATGACCGCTG TTATTATGAT TGGCGCTCCG GTAGGAATAT TTATTGCGGC ATTAATTATT GATCATTTTC CTCGTCGGTT ATTTGGCTCC ACCTTACTTA TTATTATTGC CGTGTTAGGC TATATCTATT CAATTCAGAC TACAGAGTGG GCGATTTTAA TCTATGGCCT GGTGATGATC TTCTTTTTAT ACATGTATGT TTGCTTCGCG TCGGCGGTTT ATATCCCGGA GCTTTGGCCA ACGCATTTAC GCCTGCGCGG TTCGGGTTTC GTTAATGCCG TCGGACGGAT CGTCGCAGTT TTCACGCCCT ATGGCGTTGC GGCATTATTA ACACATTATG GGTCGATCAC GGTGTTTATG GTACTTGGTG TCATGTTATT GCTTTGTGCG CTGGTTCTCT CCATTTTTGG CATCGAAACG CGGAAGGTGT CGTTGGAAGA GATTTCTGAG GTGAATTAA
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Protein sequence | MEQYDQIGAR LDRLPLARFH YRIFGIISFS LLLTGFLSYS GNVVLAKLVS NGWSNNFLNA AFTSALMFGY FIGSLTGGFI GDYFGRRRAF RINLLIVGIA ATGAAFVPDM YWLIFFRFLM GTGMGALIMV GYASFTEFIP ATVRGKWSAR LSFVGNWSPM LSAAIGVVVI AFFSWRIMFL LGGIGILLAW FLSGKCFIES PRWLAGKGQI AGAESQLREV EQQIEREKSI RLPPLTSYQS NSKVKVIKGT FWLLFKGEML RRTLVAITVL IAMNISLYTI TVWIPTIFVN SGIDVDKSIL MTAVIMIGAP VGIFIAALII DHFPRRLFGS TLLIIIAVLG YIYSIQTTEW AILIYGLVMI FFLYMYVCFA SAVYIPELWP THLRLRGSGF VNAVGRIVAV FTPYGVAALL THYGSITVFM VLGVMLLLCA LVLSIFGIET RKVSLEEISE VN
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