Gene EcE24377A_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_1992 
SymbolpncA 
ID5587829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand+ 
Start bp1977509 
End bp1978150 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content53% 
IMG OID640925664 
Productnicotinamidase/pyrazinamidase 
Protein accessionYP_001463067 
Protein GI157155759 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.46468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCATC GCGCCCTGTT ACTGGTCGAT TTACAAAATG ATTTCTGTGC TGGTGGCGCG 
CTCGCCGTGC CGGAAGGTGA CAGTACGGTA GATGTCGCTA ACCGCCTGAT TGACTGGTGC 
CAGTCGCGCG GTGAAGCGGT TATCGCCAGT CAGGACTGGC ACCCGGCGAA TCACGGCAGT 
TTTGCCAGTC AGCACGGTGT AGAGCCTTAT ACGCCAGGCC AACTCGACGG TTTGCCACAA 
ACCTTCTGGC CAGATCACTG TGTGCAGAAC AGTGAAGGCG CACAATTACA TCCGTTACTG 
AACCAAAAAG CGATCGCAGC GGTGTTCCAT AAAGGCGAAA ATCCTTTAGT TGACAGTTAC 
AGTGCCTTTT TTGATAACGG CCGTCGGCAG AAAACCTCTC TCGATGACTG GTTACGCGAT 
CATGAAATCG ATGAATTGAT CGTTATGGGC CTGGCTACTG ACTATTGCGT GAAGTTTACC 
GTGCTGGACG CGTTACAGTT AGGTTATAAG GTAAACGTGA TTACCGATGG TTGTCGTGGC 
GTGAATATCC AGCCCCAGGA CAGTGCGCAC GCGTTTATGG AGATGTCAGC AGCTGGGGCA 
ACGCTATATA CGCTGGCAGA CTGGGAAGAG ACGCAGGGGT AA
 
Protein sequence
MPHRALLLVD LQNDFCAGGA LAVPEGDSTV DVANRLIDWC QSRGEAVIAS QDWHPANHGS 
FASQHGVEPY TPGQLDGLPQ TFWPDHCVQN SEGAQLHPLL NQKAIAAVFH KGENPLVDSY 
SAFFDNGRRQ KTSLDDWLRD HEIDELIVMG LATDYCVKFT VLDALQLGYK VNVITDGCRG 
VNIQPQDSAH AFMEMSAAGA TLYTLADWEE TQG