Gene EcE24377A_1964 details

Gene Information

• Locus tag: EcE24377A_1964
• Symbol: spy
• ID: 5590728
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: -
• Start bp: 1950762
• End bp: 1951247
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640925636
• Product: periplasmic protein
• Protein accession: YP_001463039
• Protein GI: 157158229
• COG category: [N] Cell motility; [P] Inorganic ion transport and metabolism; [T] Signal transduction mechanisms; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTAAAT TAACTGCACT GTTTGTTGCC TCTACCCTGG CTCTTGGCGC GGCTAACCTG 
GCCCATGCCG CAGACACCAC TACCGCAGCA CCGGCTGACG CGAAGCCGAT GATGCACCAC 
AAAGGCAAGT TCGGTCCGCA TCAGGACATG ATGTTCAAAG ACCTGAACCT GACCGACGCG 
CAGAAACAGC AGATCCGCGA AATCATGAAA GGCCAGCGTG ACCAGATGAA ACGTCCGCCG 
CTGGAAGAAC GCCGCGCAAT GCATGACATC ATTGCCAGCG ATACCTTCGA TAAAGCAAAA 
GCTGAAGCGC AGATCGCAAA AATGGAAGAA CAGCGCAAAG CTAACATGCT GGCGCACATG 
GAAACCCAGA ACAAAATTTA CAACATCCTG ACGCCGGAAC AGAAAAAGCA ATTTAATGCT 
AATTTTGAGA AGCGTCTGAC AGAACGTCCA GCGGCAAAAG GTAAAATGCC TGCAACTGCT 
GAATAA 

 

Protein sequence

MRKLTALFVA STLALGAANL AHAADTTTAA PADAKPMMHH KGKFGPHQDM MFKDLNLTDA 
QKQQIREIMK GQRDQMKRPP LEERRAMHDI IASDTFDKAK AEAQIAKMEE QRKANMLAHM 
ETQNKIYNIL TPEQKKQFNA NFEKRLTERP AAKGKMPATA E