| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1950 |
|---|
| Symbol | |
|---|
| ID | 5588679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 1936758 |
|---|
| End bp | 1938149 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640925623 |
|---|
| Product | sodium/dicarboxylate symporter family protein |
|---|
| Protein accession | YP_001463026 |
|---|
| Protein GI | 157158064 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1823] Predicted Na+/dicarboxylate symporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTTC CATTAATTGC GAACATCGTG GTGTTCGTTG TACTGCTGTT TGCGCTGGCT
CAGACCCGCC ATAAACAGTG GAGTCTGGCG AAAAAAGTGC TGGTGGGTCT GGTGATGGGT
GTGGTTTTTG GCCTTGCCCT GCATACCATT TATGGTTCTG ACAGCCAGGT ACTTAAAGAT
TCTGTACAGT GGTTTAACAT CGTTGGTAAC GGCTATGTTC AACTGCTGCA AATGATCGTT
ATGCCGTTAG TCTTCGCCTC TATTCTGAGC GCGGTTGCCC GTCTGCATAA CGCATCTCAG
TTAGGCAAAA TCAGTTTTCT GACCATCGGT ACGCTTTTGT TTACCACACT GATTGCGGCG
CTGATCGGTG TGCTGGTCAC CAACCTGTTT GGTTTGACGG CTGAAGGTCT GGTTCAGGGT
GGTGCAGAAA CTGCACGTCT GAACGCCATC GAAAGTAACT ATGTTGGTAA AGTCTCTGAC
CTGAGCGTTC CGCAGCTGGT CTTGTCCTTT ATCCCGAAAA ACCCGTTTGC CGATCTGACC
GGAGCCAATC CGACGTCAAT TATCAGCGTG GTAATTTTTG CCGCATTCCT CGGTGTAGCT
GCGCTGAAAC TGCTGAAGGA TGATGCGCCG AAAGGTGAAC GCGTCTTAAC CGCTATCGAT
ACCCTGCAAA GCTGGGTGAT GAAACTGGTT CGCCTGGTCA TGCAGTTGAC CCCTTACGGC
GTTCTGGCAC TAATGACCAA AGTGGTTGCA GGTTCTAACC TGCAAGACAT CATCAAACTG
GGAAGTTTCG TTGTCGCGTC CTACCTCGGT CTGCTGATTA TGTTTGCAGT GCATGGCATT
CTGCTGGGCA TTAATGGCGT GAGTCCGCTG AAGTACTTCC GTAAGGTATG GCCTGTGCTG
ACGTTTGCCT TTACCAGCCG TTCCAGTGCT GCGTCTATCC CACTGAATGT GGAAGCACAA
ACGCGTCGTC TGGGCGCTCC TGAATCCATC GCCAGTTTCG CCGCCTCTTT CGGTGCAACC
ATTGGTCAGA ACGGCTGCGC CGGTTTGTAT CCGGCAATGC TGGCGGTGAT GGTTGCGCCT
ACGGTTGGCA TTAACCCGCT GGACCCGATG TGGATTGCGA CGCTGGTCGG TATTGTTACC
GTTAGTTCCG CAGGCGTTGC CGGTGTCGGT GGTGGTGCAA CTTTCGCCGC ACTGATTGTG
CTGCCTGCGA TGGGCCTGCC AGTAACCCTG GTGGCGCTGT TAATCTCCGT TGAACCGCTT
ATCGACATGG GCCGTACGGC GCTAAACGTT AGTGGCTCGA TGACAGCTGG CACGCTGACC
AGCCAGTGGC TGAAGCAAAC CGATAAAGCC ATTCTGGATA GCGAAGACGA CGCCGAACTG
GCACACCGTT AA
|
|---|
| Protein sequence | MNFPLIANIV VFVVLLFALA QTRHKQWSLA KKVLVGLVMG VVFGLALHTI YGSDSQVLKD
SVQWFNIVGN GYVQLLQMIV MPLVFASILS AVARLHNASQ LGKISFLTIG TLLFTTLIAA
LIGVLVTNLF GLTAEGLVQG GAETARLNAI ESNYVGKVSD LSVPQLVLSF IPKNPFADLT
GANPTSIISV VIFAAFLGVA ALKLLKDDAP KGERVLTAID TLQSWVMKLV RLVMQLTPYG
VLALMTKVVA GSNLQDIIKL GSFVVASYLG LLIMFAVHGI LLGINGVSPL KYFRKVWPVL
TFAFTSRSSA ASIPLNVEAQ TRRLGAPESI ASFAASFGAT IGQNGCAGLY PAMLAVMVAP
TVGINPLDPM WIATLVGIVT VSSAGVAGVG GGATFAALIV LPAMGLPVTL VALLISVEPL
IDMGRTALNV SGSMTAGTLT SQWLKQTDKA ILDSEDDAEL AHR
|
|---|
| |