| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1908 |
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| Symbol | |
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| ID | 5589016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 1899609 |
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| End bp | 1900475 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640925583 |
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| Product | quinate/shikimate dehydrogenase |
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| Protein accession | YP_001462986 |
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| Protein GI | 157159422 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTTA CCGCAAAATA CGAATTGATT GGGCTGATGG CCTATCCTAT CCGCCACAGT
TTATCGCCTA AAATGCAGAA TAAAGCCTTA GAAAAAGCGG GATTGCCATT TACCTATATG
GCCTTTGAAG TGGATAACGA TAGTTTTCCC GGAGCAATTG AAGGATTAAA AGCCCTCAAA
ATGCGCGGAA CTGGTATATC AATGCCGAAC AAACAACTGG CGTGTGAATA TGTTGATGAA
TTAACGCCAG CAGCCAAACT GGTGGGTGCC ATCAACACCA TCGTTAATGA TGATGGCTAC
CTGCGCGGCT ATAACACCGA CGGCACGGGC CATATTCGCG CCATTAAAGA GAGCGGTTTT
GATATCAAAG GCAAAACAAT GGTGCTGTTA GGGGCCGGAG GTGCCTCAAC GGCGATTGGC
GCGCAGGGGG CAATTGAAGG TTTAAAAGAA ATTAAACTCT TTAACCGTCG GGATGAGTTC
TTCGATAAAG CCCTCGCCTT CGCGCAGCGG GTTAACGAAA ACACCGATTG TGTCGTCACG
GTTACCGATC TCGCCGATCA GCAAGCCTTT GCTGAAGCCC TGGCTTCCGC CGACATTTTA
ACCAATGGCA CAAAAGTGGG TATGAAACCC CTTGAGAATG AATCATTAGT TAATGATATC
AGTCTGTTAC ATCCGGGACT GCTGGTCACT GAATGCGTGT ATAACCCGCA TATGACGAAG
TTATTGCAGC AGGCGCAACA AGCTGGTTGC AAAACGATTG ATGGATACGG CATGTTGTTG
TGGCAAGGGG CTGAACAGTT CACGTTATGG ACTGGCAAAG ATTTCCCTCT GGAATATGTT
AAACAGGTCA TGGGGTTCGG TGCCTGA
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| Protein sequence | MDVTAKYELI GLMAYPIRHS LSPKMQNKAL EKAGLPFTYM AFEVDNDSFP GAIEGLKALK
MRGTGISMPN KQLACEYVDE LTPAAKLVGA INTIVNDDGY LRGYNTDGTG HIRAIKESGF
DIKGKTMVLL GAGGASTAIG AQGAIEGLKE IKLFNRRDEF FDKALAFAQR VNENTDCVVT
VTDLADQQAF AEALASADIL TNGTKVGMKP LENESLVNDI SLLHPGLLVT ECVYNPHMTK
LLQQAQQAGC KTIDGYGMLL WQGAEQFTLW TGKDFPLEYV KQVMGFGA
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