Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1906 |
Symbol | ydiM |
ID | 5588483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 1896891 |
End bp | 1898105 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640925581 |
Product | major facilitator family transporter |
Protein accession | YP_001462984 |
Protein GI | 157158719 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATC CCTATTACCC TACCGCACTT GGGTTGTATT TTAATTACCT GGTGCATGGT ATGGGCGTCA TTTTGATGAG CCTGAATATG GCCTCGCTGG AGACACTTTG GCAGACTAAT GCCGCGGGTG TCTCGATAGT TATCTCATCG CTGGGCATTG GTCGATTAAG TGTCTTGCTT TTTGCAGGAT TATTATCCGA TCGCTTTGGT CGCCGCCCTT TTATCATGCT CGGGATGTGC TGCTATATGG CCTTCTTTTT TGGCATCCTG CACACCAATA ACATCATTAT CGCTTATGTT TTTGGCTTTC TGGCAGGAAT GGCAAACAGT TTTCTCGATG CAGGCACTTA TCCCAGTTTG ATGGAAGCTT TTCCACGCTC ACCTGGGACA GCCAATATTT TAATTAAAGC ATTTGTTTCC AGCGGACAAT TTTTATTACC GCTAATCATT AGCCTGTTAG TGTGGGCTGA ACTGTGGTTC GGTTGGTCCT TTATGATTGC TGCAGGCATT ATGTTTATTA ACGCTCTGTT TTTATACCGT TGTACGTTCC CACCCCATCC GGGTCATCGC TTACCTGTCA TAAAGAAAAC CACCAGCTCT ACGGAACATC GCTGTTCAAT TATCGATTTA GCCAGTTATA CCTTATATGG CTATATCTCA ATGGCAACGT TTTATCTGGT TAGCCAGTGG CTGGCACAGT ACGGACAATT TGTTGCAGGC ATGTCATACA CTATGTCGAT TAAACTACTC AGTATCTACA CCGTGGGTTC GCTGCTTTGT GTATTTATTA CCGCTCCACT CATTCGTAAT ACCGTTCGCC CAACAACATT ACTGATGCTG TACACCTTTA TCTCATTTAT TGCTCTGTTT ACCGTCTGCC TGCATCCCAC ATTTTATGTG GTGATAATAT TTGCTTTTGT CATTGGTTTT ACCTCTGCTG GAGGTGTTGT GCAAATTGGC CTGACGTTAA TGGCTGAACG TTTCCCTTAC GCTAAAGGTA AAGCTACAGG GATCTATTAC AGTGCGGGCA GTATTGCGAC CTTTACTATT CCGTTGATTA CGGCTCATCT GTCCCAAAGA AGTATTGCCG ATATTATGTG GTTCGATACC GCCATCGCTG CCATCGGTTT TTTACTGGCA CTGTTTATCG GCTTACGCAG CCGCAAAAAA ACGCGGCATC ACTCGCTAAA GGAAAATGTC GCTCCGGGTG GGTAA
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Protein sequence | MKNPYYPTAL GLYFNYLVHG MGVILMSLNM ASLETLWQTN AAGVSIVISS LGIGRLSVLL FAGLLSDRFG RRPFIMLGMC CYMAFFFGIL HTNNIIIAYV FGFLAGMANS FLDAGTYPSL MEAFPRSPGT ANILIKAFVS SGQFLLPLII SLLVWAELWF GWSFMIAAGI MFINALFLYR CTFPPHPGHR LPVIKKTTSS TEHRCSIIDL ASYTLYGYIS MATFYLVSQW LAQYGQFVAG MSYTMSIKLL SIYTVGSLLC VFITAPLIRN TVRPTTLLML YTFISFIALF TVCLHPTFYV VIIFAFVIGF TSAGGVVQIG LTLMAERFPY AKGKATGIYY SAGSIATFTI PLITAHLSQR SIADIMWFDT AIAAIGFLLA LFIGLRSRKK TRHHSLKENV APGG
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