Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1897 |
Symbol | sufD |
ID | 5589674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 1886339 |
End bp | 1887610 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640925572 |
Product | cysteine desulfurase activator complex subunit SufD |
Protein accession | YP_001462975 |
Protein GI | 157154860 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00143509 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGGCT TACCGAACAG CAGTAACGCG CTGCAACAGT GGCATCACTT GTTTGAAGCT GAAGGGACAA AACGCTCACC GCAAGCACAG CAGCATTTAC AACAATTGCT GCGTACCGGA CTGCCGACAC GTAAACATGA AAACTGGAAA TATACGCCGC TGGAAGGGCT GACCAATAGC CAGTTTGTCA GCATTGCGGG AAAGATATCC CCACAGCAGC GAGATGCCTT AGCGTTAACG TTAGACGCTG TGCGGCTGGT ATTTGTCGAT GGACGTTACG TGTCAGCACT GAGCGATGCG ACTGAAGGCA GCGGGTATGA AGTGAGCATT AACGACGACC GTCAGGGGGT ACCCGACGCT ATTCAGGCGG AAGTGTTTCT GCATTTGACG GAAAGCCTGG CACAAAGCGT GACGCATATC GCCGTGAAGC GCGGTCAACG GCCGGCAAAG CCATTGCTGT TAATGCATAT TACCCAGGGC GTGGCAGGTG AAGAGGTCAA CACTGCCCAT TACCGACATC ATCTGGATCT GGCGGAAGGT GCCGAAGCAA CGGTGATCGA ACATTTTGTC AGCCTTAATG ATGCTCGTCA CTTCACCGGC GCACGGTTCA CTATCAATGT CGCAGCGAAC GCCCACTTGC AGCATATCAA GCTGGCGTTT GAAAACCCGG TCAGTCACCA CTTTGCCCAT AACGATTTGT TGCTGGCTGA CGATGCCACC GCATTTAGCC ATAGTTTCCT GCTGGGTGGC GCAGTGTTAC GACACAACAC CAGTACGCAA CTCAATGGCG AAAACAGCAC GCTGCGGATC AATAGCCTGG CGATGCCGGT GAAAAACGAG GTGTGTGATA CCCGTACCTG GCTGGAACAC AATAAAGGTT TTTGTAACAG CCGACAGTTG CACAAAACTA TCGTCAGCGA CAAAGGCCGC GCGGTATTTA ACGGTTTGAT CAACGTCGCG CAGCACGCCA TCAAAACGGA TGGTCAGATG ACCAACAATA ATCTGCTGAT GGGCAAACTG GCAGAAGTGG ATACGAAACC GCAGCTGGAA ATCTATGCAG ATGATGTGAA ATGCAGCCAC GGCGCGACGG TGGGGCGTAT TGATGATGAA CAGATGTTCT ATCTGCGCTC GCGCGGGATC AATCAGCAGG ATGCCCAGCA GATGATCATT TACGCCTTTG CTGCCGAACT GACGGAAGCA CTGCGTGATG AGGGGCTTAA ACAGCAGGTG CTGGCCCGAA TCGGTCAACG ACTGCCAGGA GGTGCAAGAT GA
|
Protein sequence | MAGLPNSSNA LQQWHHLFEA EGTKRSPQAQ QHLQQLLRTG LPTRKHENWK YTPLEGLTNS QFVSIAGKIS PQQRDALALT LDAVRLVFVD GRYVSALSDA TEGSGYEVSI NDDRQGVPDA IQAEVFLHLT ESLAQSVTHI AVKRGQRPAK PLLLMHITQG VAGEEVNTAH YRHHLDLAEG AEATVIEHFV SLNDARHFTG ARFTINVAAN AHLQHIKLAF ENPVSHHFAH NDLLLADDAT AFSHSFLLGG AVLRHNTSTQ LNGENSTLRI NSLAMPVKNE VCDTRTWLEH NKGFCNSRQL HKTIVSDKGR AVFNGLINVA QHAIKTDGQM TNNNLLMGKL AEVDTKPQLE IYADDVKCSH GATVGRIDDE QMFYLRSRGI NQQDAQQMII YAFAAELTEA LRDEGLKQQV LARIGQRLPG GAR
|
| |