| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1885 |
|---|
| Symbol | |
|---|
| ID | 5590699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 1875381 |
|---|
| End bp | 1876166 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640925560 |
|---|
| Product | nickel-dependent hydrogenase, b-type cytochrome subunit |
|---|
| Protein accession | YP_001462963 |
|---|
| Protein GI | 157156596 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4117] Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0000401968 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGT CGCAACATGC TGAACAGTTT CAGAGCCAGT TAGCGAACTA TGTGCCACAG
TTCACTCCCG AATTTTGGCC GGTGTGGTTG ATCATTGCCG GAGTATTGCT GGTTGGGATG
TGGTTGGTGC TGGGGCTGCA TGCCTTGCTT CGTGCTCGTG GCGTGAAGAA ATCAGTCACC
GATTATGGTG AGAAGATTTA TCTTTACTGC AAAGCGGTCA GATTATGGCA CTGGTCGAAT
GCGTTACTCT TTGTATTGTT GCTGGCAAGT GGGCTGATAA ATCACTTTGC GCTGGTGGGC
GCAACTGCGG TTAAAAGTCT GGTTGCGGTG CATGAAGTTT GCGGATTTTT GTTACTCGCA
TGCTGGCTCG GCTTTGTGCT GATCAATGCC GTTGGGGGTA ATGGTCACCA CTATCGCATT
CGTCGTCAGG GGTGGCTGGA GCGAGCGGCA AAACAAACGC GATTTTATTT GTTTGGCATT
ATGCAGGGGG AAGAACATCC TTTCCCGGCA ACAACCCAGT CTAAATTTAA TCCCTTACAG
CAGGTCGCCT ATGTTGGTGT TATGTATGGA TTGCTGCCGT TGTTACTATT GACGGGGCTG
CTGTGTCTCT ATCCGCAAGC CGTGGGAGAT GTGTTTCCTG GCGTAAGATA CTGGTTATTG
CAGGCGCATT TTGCTCTGGC ATTTATAAGC CTCTTTTTTA TCTTCGGTCA TCTTTATCTT
TGCACCACGG GGCGTACGCC ACACGAAACC TTTAAAAGCA TGGTCGATGG CTATCACCGG
CACTAA
|
|---|
| Protein sequence | MNPSQHAEQF QSQLANYVPQ FTPEFWPVWL IIAGVLLVGM WLVLGLHALL RARGVKKSVT
DYGEKIYLYC KAVRLWHWSN ALLFVLLLAS GLINHFALVG ATAVKSLVAV HEVCGFLLLA
CWLGFVLINA VGGNGHHYRI RRQGWLERAA KQTRFYLFGI MQGEEHPFPA TTQSKFNPLQ
QVAYVGVMYG LLPLLLLTGL LCLYPQAVGD VFPGVRYWLL QAHFALAFIS LFFIFGHLYL
CTTGRTPHET FKSMVDGYHR H
|
|---|
| |