Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1855 |
Symbol | |
ID | 5590450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 1847098 |
End bp | 1847955 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640925531 |
Product | MFP family transporter |
Protein accession | YP_001462936 |
Protein GI | 157155760 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0284898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAATTA AAACAATTAA GTATTTCTCA ACAATCATTG TAGCGATAGT TGCGGTTCTT GCCGGATGGT GGCTGTGGAA TTATTACATG CAATCTCCGT GGACACGCGA CGGGAAAATA CGCGCAGAAA AGGTTTCTAT CACCCCACAG GTGTCGGGAC GTATTGTTGA GCTGAATATA AAAGACAACC AACTGGTTAA CGCGGGGGAT CTTCTGCTCA CGATCGATAA AACGCCCTTT CAGATCGCCG AGCTGAACGC ACAGGCTCAG CTGGCGAAAG CGCAATCTGA CCTCGCAAAA GCCAATAACG AAGCGAATCG TCGTCGTCAT CTCTCACAAA ATTTTATTTC TGCCGAAGAA CTCGATACCG CTAACCTCAA TGTTAAAGCG ATGCAGGCCA GTGTTAATGC CGCACAGGCC ACGCTGAAAC AGACACAATG GCAACTGGCG CAAACGGAAA TTCGCGCCCC GGTGAGTGGT TGGGTGACTA ACCTCACTAC CCGCATCGGC GATTACGCTG ACACCGGGAA ACCGCTGTTT GCCCTTGTCG ACAGCCACTC GTTTTACGTC ATTGGTTATT TTGAAGAAAC CAAGTTGCGC CATATCCGCG AAGGTGCACC AGCACAAATT ACCCTCTATA GTGATAACAA AACGTTACGG GGTCACGTTT CCAGTATCGG TCGGGCGATT TATGATCAAA GCGTTGAAAG TGACTCAAGC CTTATTCCGG ATGTGAAACC TAACGTCCCC TGGGTTCGTC TCGCCCAACG CGTTCCCGTC CGCTTTGCGC TGGATAAAGT TCCAGGCGAT GTCACGCTGG TGTCGGGCAC CACCTGTAGC ATTGCCGTAG GTCAATAA
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Protein sequence | MSIKTIKYFS TIIVAIVAVL AGWWLWNYYM QSPWTRDGKI RAEKVSITPQ VSGRIVELNI KDNQLVNAGD LLLTIDKTPF QIAELNAQAQ LAKAQSDLAK ANNEANRRRH LSQNFISAEE LDTANLNVKA MQASVNAAQA TLKQTQWQLA QTEIRAPVSG WVTNLTTRIG DYADTGKPLF ALVDSHSFYV IGYFEETKLR HIREGAPAQI TLYSDNKTLR GHVSSIGRAI YDQSVESDSS LIPDVKPNVP WVRLAQRVPV RFALDKVPGD VTLVSGTTCS IAVGQ
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