| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1848 |
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| Symbol | pdxH |
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| ID | 5587953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 1843185 |
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| End bp | 1843841 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640925524 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_001462929 |
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| Protein GI | 157159396 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000320957 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGATA ACGACGAATT GCAGCAAATC GCGCATCTGC GCCGTGAATA CACCAAAGGC
GGGTTACGCC GTCGCGATCT TCCCGCCGAT CCATTAACCC TTTTTGAACG TTGGCTCTCT
CAGGCGTGTG AAGCCAAACT GGCAGACCCT ACCGCGATGG TGGTCGCTAC CGTGGATGAA
CATGCTCAGC CTTATCAACG CATCGTTTTA CTCAAACATT ACGACGAAAA AGGCATGGTG
TTTTACACCA ACCTCGGTAG CCGTAAAGCA CATCAAATTG AAAATAATCC GCGCGTTAGC
CTGCTGTTCC CGTGGCATAC CCTTGAACGC CAGGTGATGG TGATCGGTAA AGCAGAACGA
CTTTCGACTC TCGAAGTGAT GAAATATTTT CATAGCCGCC CGCGTGATAG CCAGATTGGT
GCATGGGTTT CGAAGCAGTC CAGTCGCATT TCTGCCCGCG GTATCCTTGA AAGTAAATTC
CTGGAGCTGA AGCAGAAGTT TCAACAGGGC GAAGTGCCAT TGCCGAGCTT TTGGGGCGGT
TTTCGCATCA GCCTTGAACA GATTGAGTTC TGGCAGGGCG GTGAGCATCG CCTGCATGAC
CGCTTTTTGT ACCAGCGAGA AAATGATGCG TGGAAGATTG ATCGTCTTGC ACCCTGA
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| Protein sequence | MSDNDELQQI AHLRREYTKG GLRRRDLPAD PLTLFERWLS QACEAKLADP TAMVVATVDE
HAQPYQRIVL LKHYDEKGMV FYTNLGSRKA HQIENNPRVS LLFPWHTLER QVMVIGKAER
LSTLEVMKYF HSRPRDSQIG AWVSKQSSRI SARGILESKF LELKQKFQQG EVPLPSFWGG
FRISLEQIEF WQGGEHRLHD RFLYQRENDA WKIDRLAP
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