Gene EcE24377A_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_1827 
Symbol 
ID5585929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp1823105 
End bp1823872 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content48% 
IMG OID640925503 
Product7-alpha-hydroxysteroid dehydrogenase 
Protein accessionYP_001462908 
Protein GI157156531 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTAATT CTGACAACCT GAGACTCGAC GGAAAATGCG CCATCATCAC AGGTGCGGGT 
GCAGGTATTG GTAAAGAAAT CGCCATTACA TTCGCGACAG CTGGCGCATC TGTGGTGGTC
AGTGATATTA ACGCCGACGC AGCTAACCAT GTTGTAGACG AAATTCAACA ACTGGGTGGT
CAGGCATTTG CCTGCCGTTG TGATATTACT TCCGAACAGG AACTCTCTGC ACTGGCAGAC
TTTGCCGTCA GTAAGCTGGG TAAAGTTGAT ATCCTGGTTA ACAACGCCGG TGGCGGTGGT
CCTAAACCGT TTGATATGCC AATGGCAGAT TTTCGCCGTG CTTATGAACT GAATGTGTTT
TCTTTTTTCC ATCTGTCACA ACTTGTTGCG CCAGAAATGG AAAAAAATGG CGGTGGCGTT
ATTCTGACCA TCACTTCTAT GGCGGCAGAA AATAAAAATA TAAACATGAC TTCCTATGCA
TCATCTAAAG CTGCGGCCAG TCATCTGGTC AGAAATATGG CATTTGACCT GGGTGAAAAA
AATATTCGGG TGAATGGCAT TGCGCCGGGG GCAATATTAA CCGATGCCCT GAAATCCGTT
ATTACACCAG AAATTGAACA AAAAATGTTA CAGCACACGC CGATCAGACG TCTGGGCCAA
CCGCAAGATA TTGCTAACGC GGCGCTGTTC CTTTGCTCGC CTGCAGCCAG CTGGGTAAGC
GGACAAATTC TCACCGTCTC CGGTGGTGGG GTACAGGAGC TCAATTAA
 
Protein sequence
MFNSDNLRLD GKCAIITGAG AGIGKEIAIT FATAGASVVV SDINADAANH VVDEIQQLGG 
QAFACRCDIT SEQELSALAD FAVSKLGKVD ILVNNAGGGG PKPFDMPMAD FRRAYELNVF
SFFHLSQLVA PEMEKNGGGV ILTITSMAAE NKNINMTSYA SSKAAASHLV RNMAFDLGEK
NIRVNGIAPG AILTDALKSV ITPEIEQKML QHTPIRRLGQ PQDIANAALF LCSPAASWVS
GQILTVSGGG VQELN