Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1681 |
Symbol | gadC |
ID | 5590643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 1678790 |
End bp | 1680325 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640925364 |
Product | glutamate:gamma aminobutyrate antiporter |
Protein accession | YP_001462769 |
Protein GI | 157155815 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00910] glutamate:gamma-aminobutyrate antiporter |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTACAT CAGTACAGAC AGGTAAAGCT AAGCAGCTCA CATTACTCGG ATTCTTTGCC ATAACGGCAT CGATGGTAAT GGCTGTTTAT GAATACCCTA CCTTCGCAAC ATCGGGCTTT TCATTAGTCT TCTTCCTGCT ATTAGGCGGG ATTTTATGGT TTATTCCCGT GGGACTTTGT GCTGCGGAAA TGGCCACCGT CGACGGCTGG GAAGAAGGTG GTGTCTTCGC CTGGGTATCA AATACTCTGG GGCCGAGATG GGGATTTGCA GCGATCTCAT TTGGCTATCT GCAAATCGCC ATTGGTTTTA TTCCGATGCT CTATTTCGTG TTAGGGGCAC TCTCCTACAT CCTGAAATGG CCAGCGCTGA ATGAAGACCC CATTACCAAA ACTATTGCAG CGCTCATCAT TCTTTGGGCG CTGGCATTAA CGCAGTTTGG TGGCACGAAA TACACGGCGC GAATTGCTAA AGTTGGCTTC TTCGCCGGTA TCCTGTTACC TGCATTTATT TTGATCGCAT TAGCGGCTAT TTATCTGCAC TCCGGTGCCC CCGTTGCTAT CGAAATGGAT TCGAAGACCT TCTTCCCTGA CTTCTCTAAA GTGGGCACCC TGGTTGTATT TGTTGCCTTC ATTTTGAGTT ATATGGGCGT AGAAGCTTCC GCAACCCACG TCAATGAAAT GAGTAACCCA GGGCGCGACT ATCCACTGGC TATGTTACTG CTGATGGTGG CGGCAATCTG CTTAAGCTCT GTTGGTGGTT TGTCTATTGC GATGGTCATT CCGGGTAATG AAATCAACCT CTCCGCAGGG GTAATGCAAA CCTTTACCGT TCTGATGTCC CATGTGGCAC CGGAAATTGA GTGGACGGTT CGCGTGATCT CCGCACTGCT GTTGCTGGGT GTTCTGGCGG AAATCGCCTC CTGGATTGTT GGTCCTTCTC GCGGGATGTA TGTCACAGCG CAGAAAAACC TGCTGCCAGC GGCATTCGCT AAAATGAACA AAAATGGCGT ACCGGTAACG CTGGTCATTT CGCAGCTGGT GATTACTTCT ATCGCGTTGA TCATCCTCAC CAATACCGGT GGCGGTAACA ACATGTCCTT CCTGATCGCT CTGGCGCTGA CGGTGGTGAT TTATCTGTGT GCTTATTTCA TGCTGTTTAT TGGCTACATT GTGTTGGTTC TTAAACATCC TGACTTAAAA CGCACATTTA ATATCCCTGG TGGTAAAGGG GTGAAACTGG TCGTGGCAAT TGTCGGTCTG CTGACTTCAA TTATGGCGTT TATTGTTTCC TTCCTGCCGC CGGATAACAT CCAGGGTGAT TCTACCGATA TGTATGTTGA ATTACTGGTT GTTAGTTTCC TGGTGGTACT TGCCCTGCCC TTTATTCTCT ATGCTGTTCA TGATCGTAAA GGCAAAGCGA ATACCGGCGT CACTCTGGAG CCAATCAACA GTCAGAACGC ACCAAAAGGT CACTTCTTCC TGCACCCGCG TGCACGTTCA CCACACTATA TTGTGATGAA TGACAAGAAA CACTAA
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Protein sequence | MATSVQTGKA KQLTLLGFFA ITASMVMAVY EYPTFATSGF SLVFFLLLGG ILWFIPVGLC AAEMATVDGW EEGGVFAWVS NTLGPRWGFA AISFGYLQIA IGFIPMLYFV LGALSYILKW PALNEDPITK TIAALIILWA LALTQFGGTK YTARIAKVGF FAGILLPAFI LIALAAIYLH SGAPVAIEMD SKTFFPDFSK VGTLVVFVAF ILSYMGVEAS ATHVNEMSNP GRDYPLAMLL LMVAAICLSS VGGLSIAMVI PGNEINLSAG VMQTFTVLMS HVAPEIEWTV RVISALLLLG VLAEIASWIV GPSRGMYVTA QKNLLPAAFA KMNKNGVPVT LVISQLVITS IALIILTNTG GGNNMSFLIA LALTVVIYLC AYFMLFIGYI VLVLKHPDLK RTFNIPGGKG VKLVVAIVGL LTSIMAFIVS FLPPDNIQGD STDMYVELLV VSFLVVLALP FILYAVHDRK GKANTGVTLE PINSQNAPKG HFFLHPRARS PHYIVMNDKK H
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