| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1678 |
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| Symbol | dos |
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| ID | 5585945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 1673162 |
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| End bp | 1675585 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640925361 |
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| Product | cAMP phosphodiesterase |
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| Protein accession | YP_001462766 |
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| Protein GI | 157156733 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCAGG ATGCAGAGGT AATCATGAAG CTAACCGATG CGGATAATGC CGCCGATGGC
ATTTTTTTCC CCGCCCTTGA GCAAAATATG ATGGGTGCGG TGTTAATTAA CGAAAATGAT
GAAGTGATGT TTTTCAACCC CGCCGCAGAG AAGCTATGGG GGTACAAACG TGAAGAAGTC
ATTGGCAATA ACATTGATAT GCTGATTCCG CGAGATTTGC GTCCTGCGCA TCCTGAAAAC
ATTCGTCATA ACCGTGAAGG CGGTAAAGCG CGTGTTGAGG GGATGAGTCG GGAGCTGCAG
CTGGAGAAAA AAGACGGCAG TAAAATCTGG ACCCGTTTTG CGCTATCGAA AGTGAGCGCC
GAGGGGAAAG TTTATTACCT GGCGCTGGTA CGGGATGCCA GCGTAGAAAT GGCGCAAAAA
GAACAGACCC GACAATTGAT TATTGCCGTT GACCATCTCG ACCGACCGGT GATTGTCCTC
GATCCGGAAC GCCATATTGT GCAGTGCAAT CGCGCATTTA CCGAAATGTT TGGTTACTGC
ATTAGCGAAG CCAGCGGTAT GCAGCCCGAT ACACTCCTGA ACATTCCTGA ATTCCCTGCC
GATAACCGCA TTCGTTTACA ACAGTTGCTA TGGAAAACCG CCCGCGATCA GGACGAATTT
CTGCTGTTGA CGCGCACCGG TGAAAAAATC TGGATTAAAG CTTCTATCAG CCCGGTTTAT
GACGTGCTCG CACATCTGCA GAACCTGGTA ATGACCTTCT CGGATATCAC CGAAGAACGG
CAAATCCGCC AGCTTGAAGG CAATATTCTC GCCGCCATGT GCAGCAGCCC GCCATTTCAT
GAAATGGGGG AAATCATTTG TCGTAACATC GAATCTGTTC TCAACGAATC GCATGTTTCG
CTGTTCGCAC TGCGCAACGG GACGCCGATA CACTGGGCGT CATCTTCCCA CGGTGCAGAA
GTTCAAAATG CGCAAAGCTG GTCAGCGACC ATTCGTCAGC GTGATGGCGC GCCTGCGGGG
ATCCTGCAAA TTAAAACCTC GTCAGGAGCA GAAACCAGCG CCTTTATCGA ACGCGTGGCA
GATATCAGCC AGCATATGGC CGCGCTGGCG CTGGAACAGG AAAAAAGCCG TCAGCATATT
GAACAACTCA TCCAATTTGA TCCGATGACC GGTCTGCCAA ATCGCAATAA CCTGCACAAT
TACCTCGATG ACCTGGTCGA CAAAGCCGTC TCTCCGGTGG TGTATCTCAT CGGTGTTGAC
CATATTCAGG ATGTGATTGA TAGCCTTGGC TATGCGTGGG CCGATCAGGC ATTGCTGGAA
GTGGTCAATC GCTTTCGTGA AAAACTCAAA CCGGATCAGT ATCTCTGTCG TATCGAAGGT
ACGCAGTTTG TCCTCGTGAG CCTGGAAAAC GACGTCAGTA ACATTACCCA AATCGCCGAT
GAGCTACGGA ATGTGGTCAG CAAGCCGATA ATGATTGACG ATAAACCCTT CCCGCTTACC
TTGAGTATTG GCATCAGCTA CGACGTGGGT AAAAACCGCG ATTACCTGCT CTCCACTGCT
CACAATGCAA TGGATTATAT TCGCAAGAAT GGCGGTAACG GCTGGCAGTT CTTCAGCCCG
GCGATGAACG AAATGGTAAA AGAGCGTTTG GTTTTAGGCG CAGCGCTGAA AGAAGCGATT
AGCAATAACC AACTGAAACT TGTTTACCAG CCGCAAATCT TCGCAGAAAC GGGTGAACTG
TACGGCATCG AAGCCCTTGC GCGCTGGCAC GATCCCCAGC ATGGTCATGT GCCCCCTTCA
CGGTTTATTC CTCTCGCAGA AGAGATTGGT GAAATCGAAA ATATTGGGCG CTGGGTCATC
GCGGAAGCTT GCCGTCAGTT AGCAGAATGG CGTAGCCAGA ATATTCATAT CCCGGCGCTT
TCCGTTAACT TGTCGGCACT GCACTTTCGC AGTAATCAAC TGCCTAATCA GGTGTCTGAT
GCAATGCACG CCTGGGGTAT TGACGGCCAC CAGCTGACGG TAGAAATCAC GGAAAGCATG
ATGATGGAAC ACGATACCGA AATCTTTAAG CGCATTCAGA TCCTGCGTGA TATGGGCGTG
GGCTTATCGG TAGATGATTT TGGTACGGGC TTTTCCGGAT TATCCCGCTT AGTCAGTCTT
CCGGTAACGG AAATCAAAAT TGACAAAAGT TTTGTCGATC GTTGTCTGAC CGAAAAACGC
ATCCTTGCCT TACTTGAAGC CATTACCAGC ATTGGGCAAA GCCTCAATTT AACCGTCGTG
GCGGAAGGCG TCGAAACCAA AGAGCAATTT GAGATGCTAC GCAAGATCCA CTGTCGCGTT
ATTCAGGGAT ATTTCTTTTC CCGCCCCCTA CCCGCCGAAG AAATTCCAGG CTGGATGAGC
AGCGTGTTAC CGCTGAAAAT CTGA
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| Protein sequence | MRQDAEVIMK LTDADNAADG IFFPALEQNM MGAVLINEND EVMFFNPAAE KLWGYKREEV
IGNNIDMLIP RDLRPAHPEN IRHNREGGKA RVEGMSRELQ LEKKDGSKIW TRFALSKVSA
EGKVYYLALV RDASVEMAQK EQTRQLIIAV DHLDRPVIVL DPERHIVQCN RAFTEMFGYC
ISEASGMQPD TLLNIPEFPA DNRIRLQQLL WKTARDQDEF LLLTRTGEKI WIKASISPVY
DVLAHLQNLV MTFSDITEER QIRQLEGNIL AAMCSSPPFH EMGEIICRNI ESVLNESHVS
LFALRNGTPI HWASSSHGAE VQNAQSWSAT IRQRDGAPAG ILQIKTSSGA ETSAFIERVA
DISQHMAALA LEQEKSRQHI EQLIQFDPMT GLPNRNNLHN YLDDLVDKAV SPVVYLIGVD
HIQDVIDSLG YAWADQALLE VVNRFREKLK PDQYLCRIEG TQFVLVSLEN DVSNITQIAD
ELRNVVSKPI MIDDKPFPLT LSIGISYDVG KNRDYLLSTA HNAMDYIRKN GGNGWQFFSP
AMNEMVKERL VLGAALKEAI SNNQLKLVYQ PQIFAETGEL YGIEALARWH DPQHGHVPPS
RFIPLAEEIG EIENIGRWVI AEACRQLAEW RSQNIHIPAL SVNLSALHFR SNQLPNQVSD
AMHAWGIDGH QLTVEITESM MMEHDTEIFK RIQILRDMGV GLSVDDFGTG FSGLSRLVSL
PVTEIKIDKS FVDRCLTEKR ILALLEAITS IGQSLNLTVV AEGVETKEQF EMLRKIHCRV
IQGYFFSRPL PAEEIPGWMS SVLPLKI
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