Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1665 |
Symbol | bdhA |
ID | 5590661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 1660174 |
End bp | 1660944 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640925349 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001462754 |
Protein GI | 157158451 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAC AAGGTAAAAC TGCGCTGGTG ACGGGGTCCA CCAGCGGTAT CGGACTCGGT ATTGCTCAGA CACTGGCAAA CGCTGGCGCG CAAGTGATCC TCAACGGCTT CGGTGATGTT GACGCGGCAA TCAATGCGGT TTCTCGTATG GGTAAAACGC CTGGCTATCA TGAGGCAGAC CTCAGCGATG AATCGCAAAT TATCAACATG ATGGCCTACG CACGGCGGGA ATTTGGCGGT GTGGACATTC TGGTGAATAA CGCCGGGATC CAGTATGTCT CCCCGGTTGA ATCTTTCCCT GTAGAAAAAT GGAACGCCAT TATCGCTATC AATCTCTCTT CTGTCTTTCA CACCACGCGT CTGGCACTGC CAGAAATGCG CACTCGTAAC TGGGGTCGGA TCATTAACAT TGCCTCTGTG CATGGGCTGG TAGCGTCGAA AGACAAATCA GCTTATGTTG CGGCAAAACA TGGCGTGGTG GGACTCACAA AGACCATTGC TCTGGAAACT GCGCAGACGG GTATTACCTG CAACGCGCTC TGCCCTGGCT GGGTGCTGAC GCCGCTGGTA CAACAGCAGA TTGATAAGCG CATTGCGCAA GGCGAAGATG CGGAAAGCGC GCGTGACGCC TTACTGGCAG AAAAACAGCC TTCTCGTGAA TTTGTGACTC CGCAACAACT GGGTGAACTG GCGCTGTTTC TCTGTTCGGA TGCGGCAGCA CAAGTGCGTG GGGTGGCGTG GAATATGGAT GGCGGTTGGG TAGCGCAGTA A
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Protein sequence | MNLQGKTALV TGSTSGIGLG IAQTLANAGA QVILNGFGDV DAAINAVSRM GKTPGYHEAD LSDESQIINM MAYARREFGG VDILVNNAGI QYVSPVESFP VEKWNAIIAI NLSSVFHTTR LALPEMRTRN WGRIINIASV HGLVASKDKS AYVAAKHGVV GLTKTIALET AQTGITCNAL CPGWVLTPLV QQQIDKRIAQ GEDAESARDA LLAEKQPSRE FVTPQQLGEL ALFLCSDAAA QVRGVAWNMD GGWVAQ
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