Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1611 |
Symbol | |
ID | 5588017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 1603631 |
End bp | 1604839 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640925299 |
Product | IS605 family transposase OrfB |
Protein accession | YP_001462704 |
Protein GI | 157156473 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACGAT TACAGGCATT TAAATTCCAG TTAAGACCCG GTGGTCAACA GGAGCGTGAA ATGAGGCGCT TCGCAGGCGC ATGTCGTTTC GTTTTCAATC GTGCTCTGGC ACGTCAGAAT GAGAATCATG AGGTCGGTAA TAAATACATC CCTTACGGGA AAATGGCTTT CTGGCTGGTT GAGTGGAAAA ATGCCACTGA AACGCAATGG CTTAAAGATG CCCCGTCACA GCCATTGCAA CAGTCACTGA AAGACCTTGA GCGGGCTTAC AAAAACTTCT TCCAGAATCG GGCTGCTTTT CCCCGATTCA AAAAGCGGGG ACAGAATGAT GTATTCCGCT ACCCGCAGGG CGTTAAGCTC GATCAGGAAA ACAGCCGTAT TTTTCTGCCG AAACTGGGCT GGATGCGCTA CCGGAACAGC CGTCAGGTCA CGGGTGTTGT GAAAAATGTC ACTGTCAGCC AGTCCTGCGG TAAGTGGTAC ATCAGTATTC AGACAGAAAG TGAAGTATCC ACTCCGGTTC ACCCTTCAGC ATCAATGGTC GGGCTGGATG CTGGCGTGGC TAAACTCGCC ACGCTGTCAG ATGGCACAGT CTTTGAGCCT GTAAACAGTT TTCAGAAAAA CCAGAAGACG CTGGCGAGAC TTCAGCGACA GTTAAGCCGC AAGGTCAAAT TCAGCAACAA CTGGCAGAAG CAGAAACGCA AAATACAGCG ACTGCATTCC TGTATCGCAA ATATCCGCAG GGACTACCTT CACAAAGTCA CAACGGCCGT CAGCAAAAAC CACGCAATGA TAGTCATTGA GGATTTGAAG GTCAGCAACA TGTCAAAGTC AGCAGCGGGT ACGGTCAGCC AGCCGGGGCG CAATGTCCGG GCAAAATCAG GTTTAAACCG TTCGATACTG GATCAGGGCT GGTATGAAAT GCGCCGCCAG CTTGAGTACA AGCAGCTCTG GCGTGGCGGT CAGGTGCTTG CTGTTCCGCC AGCGTATACA AGCCAGCGTT GCGCGTACTG TGGTCATACA GCGAAAGAGA ACCGCCTGTC ACAAAGTAAA TTCAGATGCC AGGTATGTGG ATATACAGCG AACGCCGATG TAAATGGCGC TCGTAACATT TTAGCGGCGG GGCACGCCGT TCTTGCCTGT GGAGAGATGG TGCAGTCAGG CCGCCCGTTG AAGCAGGAAC CCACCGAAAT GATTCAGGCG ACAGCCTGA
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Protein sequence | MKRLQAFKFQ LRPGGQQERE MRRFAGACRF VFNRALARQN ENHEVGNKYI PYGKMAFWLV EWKNATETQW LKDAPSQPLQ QSLKDLERAY KNFFQNRAAF PRFKKRGQND VFRYPQGVKL DQENSRIFLP KLGWMRYRNS RQVTGVVKNV TVSQSCGKWY ISIQTESEVS TPVHPSASMV GLDAGVAKLA TLSDGTVFEP VNSFQKNQKT LARLQRQLSR KVKFSNNWQK QKRKIQRLHS CIANIRRDYL HKVTTAVSKN HAMIVIEDLK VSNMSKSAAG TVSQPGRNVR AKSGLNRSIL DQGWYEMRRQ LEYKQLWRGG QVLAVPPAYT SQRCAYCGHT AKENRLSQSK FRCQVCGYTA NADVNGARNI LAAGHAVLAC GEMVQSGRPL KQEPTEMIQA TA
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