Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1585 |
Symbol | paaX |
ID | 5586607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 1572440 |
End bp | 1573390 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640925275 |
Product | phenylacetic acid degradation operon negative regulatory protein PaaX |
Protein accession | YP_001462680 |
Protein GI | 157159302 |
COG category | [K] Transcription |
COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
TIGRFAM ID | [TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAC TTGATACTTT TATCCAACAT GCTGTAAACG CTGTTCCGGT CAGTGGCACA TCTTTGATCT CCTCTCTGTA TGGTGATTCG CTTTCCCATC GTGGTGGTGA AATCTGGCTT GGTAGTCTGG CTGCTTTGCT GGAAGGGCTG GGATTTGGTG AGCGTTTCGT CCGCACCGCT TTGTTTCGTC TTAATAAAGA AGGCTGGCTG GATGTTTCCC GCATCGGGCG ACGCAGTTTC TATAGCCTCA GTGATAAAGG CTTGCGCCTG ACGCGACGGG CAGAAAGTAA AATTTATCGC GCAGAGCAAC CTGCATGGGA TGGTAAATGG CTCCTGTTGC TCTCGGAAGG TTTAGATAAA TCAACGCTGG CTGATGTCAA AAAGCAGTTG ATCTGGCAAG GTTTTGGCGC ACTGGCACCC AGCCTGATGG CATCGCCGTC GCAAAAACTG GCCGATGTAC AGACACTTTT GCATGAAGCG GGTGTGGCGG ATAACGTGAT TTGTTTTGAA GCGCAAATAC CACTGGCGCT TTCTCGTGCA GCACTGCGTG CCAGAGTAGA AGAGTGCTGG CATTTAACTG AACAAAATGC CATGTACGAA ACCTTTATTC AGTCATTCCG CCCGTTGGTG CAGCTGTTAA AAGAGGCAGC AGACGAGTTA ACCCCGGAGC GTGCATTTCA TATTCAGCTT TTACTGATCC ATTTTTATCG CCGTGTCGTC CTTAAAGACC CTTTGTTGCC GGAGGAGTTG CTTCCGGCTC ACTGGGCAGG GCATACGGCG CGTCAGCTGT GTATCAACAT TTATCAGCGC GTAGCGCCTG CTGCTTTAGC GTTCGTTAGT GAAAAAGGTG AAACCTCGGT CGGTGAACTG CCTTCGCCGG GTAGCCTGTA TTTTCAACGT TTTGGCGGTT TGAATATTGA ACAGGAGGCG TTATGCCAAT TTATCAGATA G
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Protein sequence | MSKLDTFIQH AVNAVPVSGT SLISSLYGDS LSHRGGEIWL GSLAALLEGL GFGERFVRTA LFRLNKEGWL DVSRIGRRSF YSLSDKGLRL TRRAESKIYR AEQPAWDGKW LLLLSEGLDK STLADVKKQL IWQGFGALAP SLMASPSQKL ADVQTLLHEA GVADNVICFE AQIPLALSRA ALRARVEECW HLTEQNAMYE TFIQSFRPLV QLLKEAADEL TPERAFHIQL LLIHFYRRVV LKDPLLPEEL LPAHWAGHTA RQLCINIYQR VAPAALAFVS EKGETSVGEL PSPGSLYFQR FGGLNIEQEA LCQFIR
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