Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1561 |
Symbol | ydbK |
ID | 5589265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 1546161 |
End bp | 1549685 |
Gene Length | 3525 bp |
Protein Length | 1174 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640925251 |
Product | pyruvate-flavodoxin oxidoreductase |
Protein accession | YP_001462656 |
Protein GI | 157155711 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACTA TTGACGGTAA TGGCGCGGTT GCTTCGGTGG CGTTTCGCAC CAGTGAAGTT ATCGCCATCT ACCCTATTAC CCCCAGTTCC ACGATGGCAG AACAGGCTGA TGCCTGGGCC GGAAACGGCT TAAAGAACGT TTGGGGAGAC ACACCACGCG TAGTTGAAAT GCAGTCGGAA GCGGGTGCTA TCGCTACCGT GCATGGCGCT TTGCAGACGG GTGCCCTTTC AACATCGTTT ACGTCATCGC AGGGTTTGCT GCTGATGATC CCGACGCTGT ACAAACTGGC AGGCGAACTG ACGCCATTTG TCCTGCATGT AGCGGCACGT ACCGTTGCCA CACATGCACT TTCTATTTTT GGCGATCATT CCGACGTTAT GGCGGTGCGC CAGACGGGTT GCGCGATGTT GTGTGCGGCT AACGTCCAGG AAGCGCAAGA TTTTGCTCTC ATTTCGCACA TCGCAACGCT GAAGAGCCGC GTGCCATTTA TTCATTTCTT TGATGGTTTC CGCACGTCCC ACGAAATCAA TAAAATTGTC CCGCTGGCCG ATGACACTAT TCTTGATCTC ATGCCGCAGG CCGAAATTGA TGCTCATCGC GCCCGGGCGC TCAACCCGGA ACATCCGGTG ATCCGCGGTA CGTCCGCCAA TCCTGACACT TATTTCCAGT CTCGCGAAGC CACCAACCCA TGGTACGACG CGGTCTATGA CCATGTTGAA CAGGCGATGA ATGATTTCTC TGCCGCGACA GGTCGTCAGT ATCAGCCGTT TGAATATTAC GGGCATCCGC AAGCGGAACG GGTGATTATC CTGATGGGCT CTGCCATTGG CACCTGTGAA GAAGTGGTTG ATGAATTGCT AACCCGTGGC GAAAAAGTTG GCGTGCTGAA AGTTCGCCTG TACCGTCCCT TCTCCGCCAA ACACTTGCTG CAAGCTCTGC CGGGATCCGT ACGCAGCGTG GCGGTACTGG ACAGAACCAA AGAACCCGGT GCCCAGGCAG AACCGCTCTA TCTGGATGTA ATGACCGCAC TGGCAGAAGC CTTTAATAAT GGCGAGCGCG AAACTCTGCC CCGTGTCATT GGTGGGCGCT ATGGTCTTTC ATCCAAAGAA TTTGGCCCGG ACTGTGTACT GGCGGTATTT GCCGAGCTCA ACGCGGCTAA ACCGAAAGCG CGCTTTACGG TTGGTATTTA CGATGATGTG ACCAATCTGT CACTGCCGTT GCCGGAAAAC ACCCTGCCAA ACTCGGCGAA ACTGGAAGCC TTGTTTTATG GCCTTGGTAG TGATGGCAGC GTTTCCGCGA CCAAAAACAA TATCAAGATT ATCGGTAATT CCACGCCGTG GTACGCACAG GGCTATTTTG TTTACGACTC CAAAAAGGCG GGCGGCCTGA CGGTTTCTCA CCTTCGCGTG AGCGAACAGC CGATTCGTTC CGCTTATCTC ATTTCCCAGG CTGATTTTGT TGGCTGCCAC CAGTTGCAGT TTATCGATAA ATATCAGATG GCTGAGCGTT TAAAACCTGG CGGCATTTTC CTGCTCAACA CGCCGTACAG CGCAGATGAA GTGTGGTCGC GCTTGCCGCA GGAAGTTCAG GCCGTGCTAA ATCAGAAAAA AGCGCGCTTC TATGTGATTA ACGCGGCGAA AATCGCCCGC GAATGTGGCC TGGCGGCCCG TATTAATACC GTCATGCAGA TGGCTTTTTT CCATCTGACG CAAATTCTGC CTGGCGATAG CGCCCTCGCA GAATTGCAGG GTGCGATTGC CAAAAGTTAC AGTAGCAAAG GCCAGGATCT GGTGGAACGC AACTGGCAGG CTCTGGCGCT GGCGCGTGAA TCCGTAGAAG AAGTTCCGTT GCAACCGGTA AATCCGCACA GCGCCAATCG ACCGCCAGTG GTTTCCGATG CCGCCCCTGA TTTCGTGAAA ACCGTAACCG CAGCGATGCT CGCAGGGCTT GGTGATGCCC TCCCCGTTTC GGCGCTGCCG CCAGACGGCA CCTGGCCGAT GGGCACCACT CGCTGGGAAA AACGCAATAT CGCCGAAGAG ATCCCCATCT GGAAAGAGGA ACTCTGTACC CAATGTAACC ACTGCGTCGC CGCTTGCCCA CACTCAGCTA TTCGCGCAAA AGTGGTACCG CCTGAAGCGA TGGAAAACGC CCCTGCCAGC CTGCATTCGC TGGATGTGAA ATCGCGTGAT ATGCGCGGGC AGAAATATGT CTTGCAGGTG GCTCCGGAAG ATTGCACCGG TTGTAACCTG TGCGTCGAAG TTTGCCCGGC GAAAGACCGT CAGAATCCAG AGATTAAAGC CATCAATATG ATGTCGCGCC TGGAACATGT CGAAGAAGAG AAAATCAATT ACGATTTCTT CCTCAACCTG CCAGAAATCG ACCGTAGCAA ACTGGAACGT ATTGATATTC GTACATCGCA GCTGATTACA CCGCTGTTTG AATATTCAGG TGCTTGCTCC GGTTGTGGCG AGACGCCGTA TATTAAATTG CTGACTCAGC TCTATGGCGA CCGGATGTTG ATCGCTAACG CCACCGGCTG TTCTTCAATT TATGGCGGTA ACCTGCCCTC TACACCGTAT ACCACCGATG CCAACGGTCG TGGGCCGGCA TGGGCGAACT CTCTGTTTGA AGATAATGCC GAATTTGGCC TTGGTTTCCG CCTGACGGTC GATCAACACC GTGTCCGCGT GCTGCGTCTG CTGGATCAAT TTGCCGATAA AATCCCGGCG GAATTACTGA CAGCGTTGAA ATCAGACGCT ACGCCAGAGG TTCGTCGAGA ACAGGTCGCA GCTTTACGCC AGCAACTCAA CGATGTTGCC GAAGCACATG AACTGCTGCG TGACGCAGAT GCACTGGTGG AAAAATCAAT CTGGCTGATT GGTGGCGACG GCTGGGCTTA CGATATCGGC TTTGGCGGTC TGGATCATGT ATTGAGTTTG ACGGAAAACG TCAACATTCT GGTGCTGGAT ACGCAATGCT ATTCCAACAC CGGTGGTCAG GCGTCGAAAG CGACACCGCT GGGTGCAGTA ACTAAATTTG GCGAGCACGG CAAACGTAAA GCGCGTAAAG ATCTTGGCGT CAGTATGATG ATGTACGGTC ATGTTTATGT GGCGCAGATT TCTCTCGGCG CGCAGCTCAA CCAGACGGTG AAAGCGATTC AGGAAGCGGA AGCGTATCCG GGGCCATCGC TGATCATCGC TTATAGCCCA TGTGAAGAGC ATGGTTACGA TCTGGCACTC AGCCACGACC AGATGCGCCA ACTCACAGCT ACCGGCTTCT GGCCGCTATA TCGCTTCGAT CCGCGTCGTG CCGATGAAGG CAAACTGCCG CTGGCGCTGG ATTCACGCCC GCCGTCAGTA GCACTGGAAG AAACGTTACT TCACGAGCAA CGTTTCCGTC GGCTGAATTC GCAGCAGCCA GAAGTGGCAG AACAGTTATG GAAAGATGCT GCAGCTGATT TGCAAAAACG CTATGACTTC CTGGCACAAA TGGCCGGAAA AGCGGAAAAA AGCAACACCG ATTAA
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Protein sequence | MITIDGNGAV ASVAFRTSEV IAIYPITPSS TMAEQADAWA GNGLKNVWGD TPRVVEMQSE AGAIATVHGA LQTGALSTSF TSSQGLLLMI PTLYKLAGEL TPFVLHVAAR TVATHALSIF GDHSDVMAVR QTGCAMLCAA NVQEAQDFAL ISHIATLKSR VPFIHFFDGF RTSHEINKIV PLADDTILDL MPQAEIDAHR ARALNPEHPV IRGTSANPDT YFQSREATNP WYDAVYDHVE QAMNDFSAAT GRQYQPFEYY GHPQAERVII LMGSAIGTCE EVVDELLTRG EKVGVLKVRL YRPFSAKHLL QALPGSVRSV AVLDRTKEPG AQAEPLYLDV MTALAEAFNN GERETLPRVI GGRYGLSSKE FGPDCVLAVF AELNAAKPKA RFTVGIYDDV TNLSLPLPEN TLPNSAKLEA LFYGLGSDGS VSATKNNIKI IGNSTPWYAQ GYFVYDSKKA GGLTVSHLRV SEQPIRSAYL ISQADFVGCH QLQFIDKYQM AERLKPGGIF LLNTPYSADE VWSRLPQEVQ AVLNQKKARF YVINAAKIAR ECGLAARINT VMQMAFFHLT QILPGDSALA ELQGAIAKSY SSKGQDLVER NWQALALARE SVEEVPLQPV NPHSANRPPV VSDAAPDFVK TVTAAMLAGL GDALPVSALP PDGTWPMGTT RWEKRNIAEE IPIWKEELCT QCNHCVAACP HSAIRAKVVP PEAMENAPAS LHSLDVKSRD MRGQKYVLQV APEDCTGCNL CVEVCPAKDR QNPEIKAINM MSRLEHVEEE KINYDFFLNL PEIDRSKLER IDIRTSQLIT PLFEYSGACS GCGETPYIKL LTQLYGDRML IANATGCSSI YGGNLPSTPY TTDANGRGPA WANSLFEDNA EFGLGFRLTV DQHRVRVLRL LDQFADKIPA ELLTALKSDA TPEVRREQVA ALRQQLNDVA EAHELLRDAD ALVEKSIWLI GGDGWAYDIG FGGLDHVLSL TENVNILVLD TQCYSNTGGQ ASKATPLGAV TKFGEHGKRK ARKDLGVSMM MYGHVYVAQI SLGAQLNQTV KAIQEAEAYP GPSLIIAYSP CEEHGYDLAL SHDQMRQLTA TGFWPLYRFD PRRADEGKLP LALDSRPPSV ALEETLLHEQ RFRRLNSQQP EVAEQLWKDA AADLQKRYDF LAQMAGKAEK SNTD
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