Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1500 |
Symbol | sapB |
ID | 5590190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 1486232 |
End bp | 1487197 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640925192 |
Product | peptide ABC transporter, permease protein SapB |
Protein accession | YP_001462597 |
Protein GI | 157158421 |
COG category | [V] Defense mechanisms |
COG ID | [COG4168] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATCT TCACCTTACG CCGCATTTTG TTATTGATTG TCACCTTGTT CCTGCTGACC TTCGTTGGCT TCAGTTTGAG CTATTTCACT CCACACGCGC CGTTACAAGG CGCGTCACTG TGGAATGCCT GGGTGTTCTG GTTTAACGGC CTGATCCACT GGGATTTTGG TGTTTCCAGC ATTAACGGTC AACCGATTGC CGAACAGTTA AAAGAGGTCT TCCCTGCGAC GATGGAACTG TGCATCCTCG CCTTCGGTTT TGCGCTGATT GTTGGCATCC CCGTGGGGAT GATTGCCGGG ATTACGCGCC ATAAGTGGCA GGATAACTTG ATCAACGCCA TCGCCTTGCT GGGCTTTTCA ATCCCGGTGT TCTGGCTGGC GCTTCTGTTG ACGCTGTTTT GTTCACTCAC GCTAGGTTGG TTGCCCGTTT CAGGGCGTTT CGATCTGCTG TACGAAGTGA AACCGATTAC CGGGTTTGCG TTGATTGATG CCTGGCTTTC GGACTCACCA TGGCGGGATG AAATGATCAT GAGCGCAATC CGCCATATGA TATTGCCCGT GATCACCCTG TCGGTTGCGC CAACAACTGA AGTGATCCGA CTGATGCGTA TCAGCACTAT CGAAGTGTAT GACCAGAACT ATGTTAAAGC GGCGGCTACC CGCGGTTTGT CGCGCTTTAC TATTTTGCGT CGCCACGTTC TGCATAACGC GTTACCGCCG GTTATTCCTC GCCTGGGCTT ACAGTTTTCC ACCATGCTGA CGCTGGCAAT GATCACCGAA ATGGTTTTTA GCTGGCCGGG TTTAGGGCGC TGGTTAATTA ACGCCATCCG CCAGCAGGAT TACGCAGCCA TTTCCGCCGG AGTGATGGTG TGTGGCTCAC TGGTCATTAT TGTTAACGTG ATTTCTGATA TTTTGGGTGC CATGGCTAAC CCTCTGAAAC ATAAGGAATG GTATGCCTTA CGATAG
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Protein sequence | MIIFTLRRIL LLIVTLFLLT FVGFSLSYFT PHAPLQGASL WNAWVFWFNG LIHWDFGVSS INGQPIAEQL KEVFPATMEL CILAFGFALI VGIPVGMIAG ITRHKWQDNL INAIALLGFS IPVFWLALLL TLFCSLTLGW LPVSGRFDLL YEVKPITGFA LIDAWLSDSP WRDEMIMSAI RHMILPVITL SVAPTTEVIR LMRISTIEVY DQNYVKAAAT RGLSRFTILR RHVLHNALPP VIPRLGLQFS TMLTLAMITE MVFSWPGLGR WLINAIRQQD YAAISAGVMV CGSLVIIVNV ISDILGAMAN PLKHKEWYAL R
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