| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1497 |
|---|
| Symbol | sapF |
|---|
| ID | 5587794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 1483555 |
|---|
| End bp | 1484361 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640925189 |
|---|
| Product | peptide ABC transporter, ATP-binding protein SapF |
|---|
| Protein accession | YP_001462594 |
|---|
| Protein GI | 157156325 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG4167] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAA CGCTGCTTGA AGTGCGTAAT TTAAGTAAAA CGTTCCGCTA CCGGACCGGC
TGGTTTCGTC GTCAGACCGT AGAAGCGGTA AAACCCTTGA GCTTTACGCT ACGTGAAGGC
CAGACACTGG CGATTATTGG CGAGAATGGT TCGGGTAAAT CCACGCTGGC AAAAATGCTG
GCGGGAATGA TAGAGCCTAC CAGCGGCGAG TTATTGATTG ACGATCATCC ACTGCATTTT
GGCGATTATT CCTTCCGCAG TCAGCGTATT CGCATGATTT TTCAGGATCC TTCGACCTCG
TTGAATCCCC GTCAACGTAT CTCGCAAATT CTGGATTTTC CACTGCGCCT GAACACCGAC
CTGGAACCGG AACAGCGTCG CAAACAGATT ATTGAAACGA TGCGTATGGT TGGGCTGCTA
CCGGATCACG TCAGTTACTA TCCGCATATG TTGGCACCCG GACAAAAACA GCGTCTGGGT
CTGGCGCGCG CGCTGATATT GCGCCCAAAA GTCATTATTG CCGATGAAGC CCTCGCTTCA
CTGGATATGT CGATGCGTTC GCAGTTGATT AATCTGATGC TGGAGTTACA GGAAAAACAG
GGCATTTCGT ATATTTATGT TACCCAGCAT ATCGGAATGA TGAAGCACAT TAGCGACCAG
GTGCTGGTGA TGCATCAGGG CGAGGTTGTC GAACGAGGCA GCACCGCGGA TGTGCTGGCA
TCGCCGCTGC ATGAACTCAC CAAACGGCTG ATTGCCGGGC ACTTTGGCGA AGCATTGACA
GCGGATGCGT GGCGTAAAGA TCGCTAA
|
|---|
| Protein sequence | MIETLLEVRN LSKTFRYRTG WFRRQTVEAV KPLSFTLREG QTLAIIGENG SGKSTLAKML
AGMIEPTSGE LLIDDHPLHF GDYSFRSQRI RMIFQDPSTS LNPRQRISQI LDFPLRLNTD
LEPEQRRKQI IETMRMVGLL PDHVSYYPHM LAPGQKQRLG LARALILRPK VIIADEALAS
LDMSMRSQLI NLMLELQEKQ GISYIYVTQH IGMMKHISDQ VLVMHQGEVV ERGSTADVLA
SPLHELTKRL IAGHFGEALT ADAWRKDR
|
|---|
| |